Gene Synpcc7942_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2008 
Symbol 
ID3774195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2075871 
End bp2076353 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content56% 
IMG OID637800453 
Producthypothetical protein 
Protein accessionYP_401025 
Protein GI81300817 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGACG AACAAGCTAA AAAGACCTTG CTGCGCAAAA TTCCGCATGG TCTTTACGTT 
TGCGGCGTCA AGGATGGCGA GGAGATCAAC GGCTTTACTG CCAGCTGGGT GATGCAGGGC
TCGTTCCAGC CGCCCTTAGT GATCAACTGT GTCAAATCCG ACTCGCGCTC CCATGCCATG
CTCTCGGCAA GCGGCGTCTT CAGCTTGAGC TTCTTGGAAG CAGGCCAGAA GGATCTGGCC
GCTCAATTCT TTAAGCCGCA GCGCTTGGTT GCCAATAAAT TTGAAACGGT CAACGCCTAC
CTCGGCGAAG CCACCGGTTG CCCAATTTTG GAAGAGGCCC TGGGCTACGT CGAATGCCGT
GTAGTCGGCA AGGTTGAGCA CGGGGATCAC ACGGTTTTCG TCGGTGAAGT GATTGCTGCA
GGCTTACACA GCGAGGGGGA CCTGCTGACG CTGGAAAGCA CCGGCTGGAA CTACGGCGGC
TAA
 
Protein sequence
MLDEQAKKTL LRKIPHGLYV CGVKDGEEIN GFTASWVMQG SFQPPLVINC VKSDSRSHAM 
LSASGVFSLS FLEAGQKDLA AQFFKPQRLV ANKFETVNAY LGEATGCPIL EEALGYVECR
VVGKVEHGDH TVFVGEVIAA GLHSEGDLLT LESTGWNYGG