| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1993 |
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| Symbol | |
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| ID | 3774180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2063554 |
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| End bp | 2064174 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800438 |
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| Product | methylthioribulose-1-phosphate dehydratase |
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| Protein accession | YP_401010 |
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| Protein GI | 81300802 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR03328] methylthioribulose-1-phosphate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.5622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAGTT CTTCTGACCC ACGCCAAGCC CTCAGTTGGG TGATTCAAGA CCTACACAAA
CGAGGCTGGG CCACAGGCAC CGGTGGCAAC TTTAGTCTGG TCACGCGCCG CGATCCACTC
CGGTTGCTGA TGGCTCCTAG TGGGGTCGAT AAAGGACTCG TGCAGCCCGA TGAACTAATT
GAAGTGGACG CCAAAAGTCA GGTGGTAACA GGCAATGGCA AAGCTTCAGC AGAAACACTA
CTGCATCTAG CGATCATTCA GCAAACAGGC GCAGCCTCAG TGCTCCACAC CCATTCCCCG
ATCGCGACTC TACTCTCGCG GCGAGCGGAA GTTACTGGCG CGATCGCCTT CTCCGGCTAC
GAAATGCAGA AGGGGCTGGA GGGCATCACC ACTCACGAGA CTGAAGTTCA CCTGCCGGTG
TTTCCCAACG ATCAAGATAT GGCAGCCCTC AGCCAGGCTG TCCTACCGCA GCTCCAAGCT
GCACCACCCT GGGGCGTGTT GATTGCAGGC CACGGCCTCT ATGCCTGGGG CAATAGTCTG
TTTGCGGCGC GGCGACATGT TGAGATCCTA GAATTCCTGC TGGAACTGCA CTACCGCGAG
CTCACTCTCC TTCCTCACTA A
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| Protein sequence | MLSSSDPRQA LSWVIQDLHK RGWATGTGGN FSLVTRRDPL RLLMAPSGVD KGLVQPDELI
EVDAKSQVVT GNGKASAETL LHLAIIQQTG AASVLHTHSP IATLLSRRAE VTGAIAFSGY
EMQKGLEGIT THETEVHLPV FPNDQDMAAL SQAVLPQLQA APPWGVLIAG HGLYAWGNSL
FAARRHVEIL EFLLELHYRE LTLLPH
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