Gene Synpcc7942_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1973 
Symbol 
ID3774160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2043151 
End bp2044320 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content53% 
IMG OID637800418 
Productmannose-1-phosphate guanyltransferase 
Protein accessionYP_400990 
Protein GI81300782 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.878472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA TGATTTTGGC CGCCGGTAAG GGAACCCGAG TTCGGCCGAT TACCTACACC 
ATTCCTAAGC CGATGATTCC TATCCTGCAG AAGCCAGTGA TGGAGTTTCT GCTGGAGCTC
TTAAAGGAGC ATGGCTTCAA GGAAGTCATG GTCAATGTCA GCCATTTAGC CCAAGAAATT
GAAAGCTATT TCCGAGATGG GCAGCGCTTT GGCGTCGAGG TTGCCTATTC TTTTGAAGGC
CGAATTGAAG ATGGTCAGCT GATTGGAGAA GCCCTCGGCT CTGCGGGCGG GATGAAGCGA
ATTCAGGATT TCTCGCCTTT CTTTGATGAT ACGTTTGTCG TCCTTTGTGG TGATGCCCTG
ATTGACTTAG ACCTGACAGA AGCTGTGCGC TGGCACAAGG AAAAGGGTGC TCTTGCCACG
ATCGTGATGA AGACGGTTCC CCGTGAAGAA GTGTCGAGTT ATGGGGTTGT GGTTACCGAT
AGCGATGGTC GGATCCAAGC CTTTCAAGAA AAACCCAGTG TTGAGGAAGC GCTGAGCACG
ACGATCAATA CCGGGATCTA CATCTTTGAG CCCGAGATCC TCAACTACAT TCCTTCGGGA
CAGGAATACG ACATCGGTGG TGATCTCTTC CCGAAACTGG TAGAGACTGG TGCTCCGTTC
TATGGCATCT CCATGGACTT CCAGTGGATC GATATCGGTA AGGTGCCGGA CTACTGGCAG
GCAATCCGCA GTGTTTTGAA TGGAGAAGTG CGAAACGTCG CTATCCCTGG CAAGCAGGTC
AGACCTGGGG TCTATACCGG TCTCAATGTG GCGATCGACT GGGATTCGGT CGCAATCGAA
GGCCCCGTCT ACATCGGTGG TATGACGCGC ATTGATGAAG GTGTGCGAAT TGTGGGGCCG
GCAATGATTG GGCCGAATTG CCACATCTGC AAGGGTGCCA CGATCGAAAA CAGCGTGATT
TTCGAATATT CGCGCCTGGG TTCCGGCGTC CGTCTTGTCG ACAAACTGGT GTTCGGTCGC
TACTGCGTCG ACCGCAACGG CAACGCAATT GATGTGCAAG CCGCCGCTTT GGACTGGTTG
ATCACCGATG CCCGCCGTGC TGAACCGGTG CAACCTTCAG CCGAGCACCA GGCGATCGCT
GACCTCTTGG GCAGTAATGT CTTGCCCTAG
 
Protein sequence
MKAMILAAGK GTRVRPITYT IPKPMIPILQ KPVMEFLLEL LKEHGFKEVM VNVSHLAQEI 
ESYFRDGQRF GVEVAYSFEG RIEDGQLIGE ALGSAGGMKR IQDFSPFFDD TFVVLCGDAL
IDLDLTEAVR WHKEKGALAT IVMKTVPREE VSSYGVVVTD SDGRIQAFQE KPSVEEALST
TINTGIYIFE PEILNYIPSG QEYDIGGDLF PKLVETGAPF YGISMDFQWI DIGKVPDYWQ
AIRSVLNGEV RNVAIPGKQV RPGVYTGLNV AIDWDSVAIE GPVYIGGMTR IDEGVRIVGP
AMIGPNCHIC KGATIENSVI FEYSRLGSGV RLVDKLVFGR YCVDRNGNAI DVQAAALDWL
ITDARRAEPV QPSAEHQAIA DLLGSNVLP