Gene Synpcc7942_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1967 
Symbol 
ID3774154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2037772 
End bp2038638 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content55% 
IMG OID637800412 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_400984 
Protein GI81300776 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.39732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATTG CTGTCAGTAG TGCCGATCGC CTCGACCTTT GGCAGGCCAT TGTCTTGGGA 
TTTGTGCAAG GCGCCACTGA ATTCCTTCCG ATCAGCAGCA CCGCCCATTT GAAAGTGGTG
CCGGTGGTTC TCGGCTGGGG CGATCCTGGG GTGGCCTTTA CCGCAGTCAT TCAACTCGGC
AGCATTGTCG CGGTACTGTC CTATTTCCGT CAGGACTTGA CCTACGTGTT GCGCGGCTTG
GTCAGCGCTG TGCGCCGGCA GGATTTTCGT AGTGAACCAG CTCAGATGGG TCTGGGCATT
CTATTTGGCA CTATTCCGAT CCTGATTGGC GGGCTGCTGA TCAAGCGGTT CATTCCCGAT
TACGACAACT CTCCCTTGCG CAGTTTGGCC GCGATCGCGA TCGTCTCAAT TGTGATGGGT
TTGCTGCTGG GCATTGCAGA ACAACTGAGC AAGCATCAGC GCGACCTCAG TCAATTGCGC
CTCGCTGATG GCCTCTGGAT GGGTTTTGCC CAAGCACTGG CCTTGATTCC CGGCGTTTCG
CGATCGGGTT CGACCCTCAC TGCCGGACTC TTTCAAGGCT TGAAACGGGA TACGGCTGCT
CGCTTTTCCT TTCTGCTCGG GATTCCAGCA ATCACAATCG CCGGCTTAGT AGAACTCAAA
GATTTATTAG AAGCCGGCAT CGATGGCTCT TCGCTTGGGG TGCTCGCGAT CGGGACCCTG
TCTTCCCTGA TTTTTTCTTG GTTGGCAATC GCCTGGTTAC TGCGTTTTCT CCGCACTCAT
AACACGTGGA GCTTCGTGGT TTATCGGATC ATCTTCGGGG GGGTAATTCT GACGGCAATC
GCCACGGGAA CTTTACAGAA TATTTAA
 
Protein sequence
MLIAVSSADR LDLWQAIVLG FVQGATEFLP ISSTAHLKVV PVVLGWGDPG VAFTAVIQLG 
SIVAVLSYFR QDLTYVLRGL VSAVRRQDFR SEPAQMGLGI LFGTIPILIG GLLIKRFIPD
YDNSPLRSLA AIAIVSIVMG LLLGIAEQLS KHQRDLSQLR LADGLWMGFA QALALIPGVS
RSGSTLTAGL FQGLKRDTAA RFSFLLGIPA ITIAGLVELK DLLEAGIDGS SLGVLAIGTL
SSLIFSWLAI AWLLRFLRTH NTWSFVVYRI IFGGVILTAI ATGTLQNI