Gene Synpcc7942_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1963 
Symbol 
ID3774148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2033871 
End bp2034767 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content60% 
IMG OID637800406 
Producthypothetical protein 
Protein accessionYP_400980 
Protein GI81300772 
COG category[V] Defense mechanisms 
COG ID[COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGTGG CCTGGCCAGC ACCCCTTCAG CCCGGCGATC GCTTGCTGGC CATTGCACCC 
AGCGGTTGCC TGCGCGAACT AGATGCCCTA CAAGCGGCTC TGGAACTCTG GTGGCAGGCC
GGCTTTTCAA TCGATTTGGC ACCTCACTGG CGAGATCAAC AGGGCTACCT AGCGGGTAGC
GATCACGATC GCTTAGCGGA CTTAAAAGAA GGGTGGCTGG ATCCGCGCTA TCGCGGCTTG
GTTTGCATTC GTGGTGGCTG GGGTGCAGCA CGACTGCTGG AAGCTTGCGA TGACTGGCCA
ACTCCGCCGC AACCGAAGTG GCTGGTCGGC TTTTCTGATA TCACCACGCT GTTGTGGACG
CTGACTCGCC AGCAACGGGG AGCCATCCAT GCTCCTGTGC TGACTACCTT GGCAGCGGAA
CCGGCGCGAT CGCGGCAGCG ACTTTGGGAT TGTCTGCAAG GCAAACCGTT AGAACCGCTG
ACCGGTAGCG TTTGGGTGCC TGGCTCTGCC CAAGGCCCGC TCTATCCTGC CAATCTGACC
GTGGCGACCC ATCTACTCGG AACGCCTTGG CTACCCGACC TACGCGGCGC AATCTTGGCG
ATCGAAGATG TCTCAGAACA ACCCTATCGG CTCGATCGCC TGCTGACTCA GTGGCGTTTG
AGCGGTCAGC TGCAGCAACT GGCCGGTATT GCAGTTGGGC GCTTTAGTCA GTGCGATCCG
CCCAGCGATC GCCCAAGTTT TACGGTGGAA GCTGTCTTAC GCGATCGCCT CAGTGACCTC
GGGATTCCTG TCCTCGCCGA TCTTCCGTTT GGTCACGACG GCGAAAATGC AGTGCTACCA
GTCGGGGCAA TCGCCCAGAT TGCGGGTGAT CAATTGCAGA TTCACTGGCC CGCTTAA
 
Protein sequence
MTVAWPAPLQ PGDRLLAIAP SGCLRELDAL QAALELWWQA GFSIDLAPHW RDQQGYLAGS 
DHDRLADLKE GWLDPRYRGL VCIRGGWGAA RLLEACDDWP TPPQPKWLVG FSDITTLLWT
LTRQQRGAIH APVLTTLAAE PARSRQRLWD CLQGKPLEPL TGSVWVPGSA QGPLYPANLT
VATHLLGTPW LPDLRGAILA IEDVSEQPYR LDRLLTQWRL SGQLQQLAGI AVGRFSQCDP
PSDRPSFTVE AVLRDRLSDL GIPVLADLPF GHDGENAVLP VGAIAQIAGD QLQIHWPA