Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1963 |
Symbol | |
ID | 3774148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2033871 |
End bp | 2034767 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637800406 |
Product | hypothetical protein |
Protein accession | YP_400980 |
Protein GI | 81300772 |
COG category | [V] Defense mechanisms |
COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGTGG CCTGGCCAGC ACCCCTTCAG CCCGGCGATC GCTTGCTGGC CATTGCACCC AGCGGTTGCC TGCGCGAACT AGATGCCCTA CAAGCGGCTC TGGAACTCTG GTGGCAGGCC GGCTTTTCAA TCGATTTGGC ACCTCACTGG CGAGATCAAC AGGGCTACCT AGCGGGTAGC GATCACGATC GCTTAGCGGA CTTAAAAGAA GGGTGGCTGG ATCCGCGCTA TCGCGGCTTG GTTTGCATTC GTGGTGGCTG GGGTGCAGCA CGACTGCTGG AAGCTTGCGA TGACTGGCCA ACTCCGCCGC AACCGAAGTG GCTGGTCGGC TTTTCTGATA TCACCACGCT GTTGTGGACG CTGACTCGCC AGCAACGGGG AGCCATCCAT GCTCCTGTGC TGACTACCTT GGCAGCGGAA CCGGCGCGAT CGCGGCAGCG ACTTTGGGAT TGTCTGCAAG GCAAACCGTT AGAACCGCTG ACCGGTAGCG TTTGGGTGCC TGGCTCTGCC CAAGGCCCGC TCTATCCTGC CAATCTGACC GTGGCGACCC ATCTACTCGG AACGCCTTGG CTACCCGACC TACGCGGCGC AATCTTGGCG ATCGAAGATG TCTCAGAACA ACCCTATCGG CTCGATCGCC TGCTGACTCA GTGGCGTTTG AGCGGTCAGC TGCAGCAACT GGCCGGTATT GCAGTTGGGC GCTTTAGTCA GTGCGATCCG CCCAGCGATC GCCCAAGTTT TACGGTGGAA GCTGTCTTAC GCGATCGCCT CAGTGACCTC GGGATTCCTG TCCTCGCCGA TCTTCCGTTT GGTCACGACG GCGAAAATGC AGTGCTACCA GTCGGGGCAA TCGCCCAGAT TGCGGGTGAT CAATTGCAGA TTCACTGGCC CGCTTAA
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Protein sequence | MTVAWPAPLQ PGDRLLAIAP SGCLRELDAL QAALELWWQA GFSIDLAPHW RDQQGYLAGS DHDRLADLKE GWLDPRYRGL VCIRGGWGAA RLLEACDDWP TPPQPKWLVG FSDITTLLWT LTRQQRGAIH APVLTTLAAE PARSRQRLWD CLQGKPLEPL TGSVWVPGSA QGPLYPANLT VATHLLGTPW LPDLRGAILA IEDVSEQPYR LDRLLTQWRL SGQLQQLAGI AVGRFSQCDP PSDRPSFTVE AVLRDRLSDL GIPVLADLPF GHDGENAVLP VGAIAQIAGD QLQIHWPA
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