| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1935 |
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| Symbol | |
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| ID | 3775298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2009232 |
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| End bp | 2010020 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637800377 |
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| Product | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A |
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| Protein accession | YP_400952 |
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| Protein GI | 81300744 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAG CCGTTGCGCT GCTGTTTGTC GCAGTTTTGG GAGCCGCGAT CGGGAGCTTT
TTAAATGTGG TGATCTACCG ATTGCCCCTC GGTCTGTCAC TGCTGCATCC CCCCTCCCGC
TGTCCCTACT GCCGGCGATC GCTGCGGCCG CAAGATAATC TGCCGGTTGT TGGCTGGCTA
AAGCTGCGGG GGCGTTGCCA TTTCTGCCAG CATCGGATTC CCGCTCGCTA CCCAATTGTT
GAAGCCCTAA CTGCTGCTCT GTTCGTCCTG CTGGCGGTGC AGTTTGGCTG GTCTGCGGCC
ACGCTCGGCG GCTGGATTTT TTTCTCGTGG TTGCTTGCGC TCAGTGTCAT AGACCTCGAT
ACGATGACCC TACCCAATGT CTTGACGGCG TCGGGGCTGG CGGTGGGTGT GGCTTTTCAG
TTGGCGATCG CACCCGCAAC CTGGCCCGTG ACCCTGTTCT GGTCCTTGTT TGTGGCGATC
GCGGCGCTAT GGCTGAGTGA TCTATTTCGC TGGCTGGGAG AATTCGCTCT GCGGCAGCCG
GTGCTCGGGG GCGGTGACAG CAAGTTGTTG GCGCTGTTGG GTGTTTGGCT GGGCGGGCCC
AAACTCCTTT TGGCACTGTT CCTTGCTTGC CTGAGTGGTG CAATCGCGGG GGGGATTGGG
CGTTGGCGCG GCACCCTCAA ACCCATGCAA GCAATGCCTT TTGGCCCATT CCTGGCCTTG
GGTGGGGCGA TCGCTTGGAT CTGGGGAGCC GAGTGGATTG ATCTCTATAT GCGAGTTTTG
CTCTTTTAA
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| Protein sequence | MFEAVALLFV AVLGAAIGSF LNVVIYRLPL GLSLLHPPSR CPYCRRSLRP QDNLPVVGWL
KLRGRCHFCQ HRIPARYPIV EALTAALFVL LAVQFGWSAA TLGGWIFFSW LLALSVIDLD
TMTLPNVLTA SGLAVGVAFQ LAIAPATWPV TLFWSLFVAI AALWLSDLFR WLGEFALRQP
VLGGGDSKLL ALLGVWLGGP KLLLALFLAC LSGAIAGGIG RWRGTLKPMQ AMPFGPFLAL
GGAIAWIWGA EWIDLYMRVL LF
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