| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1933 |
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| Symbol | |
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| ID | 3775296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2006589 |
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| End bp | 2007635 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637800375 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_400950 |
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| Protein GI | 81300742 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTTCC CGATCGCAGC TGAGTCGTCC CTCCCCCAAC GGAAAGCTGA ACATCTCCAA
CTCTGTCTTG AGGCTGGAGT CGAAAGCCCC GAGGTGACGA CCGGGTTGGA GCGCTATCGT
TTCCAGCATT GTGCGCTGCC AAATTTGAGT CTGCAGGCGC TGGACCTAGG GACGCAGTTC
TTGGGGCGAT CGCTGGGGGC ACCGCTGCTG ATCTCGTCGA TGACCGGCGG AACCGAAACC
GCGCAGCGGA TCAACTGTCG TTTGGCGATC GCGGCGCAGA AGTATCGGCT CGCCATGGGT
GTGGGTTCCC AACGGGTAAT GCTGCGGCAG CCTGAGACCA CGCCAACCTT TGACGTACGG
GATCTGGCGC CCGATATTTT GCTGCTTGCC AACCTTGGCG CCGTGCAACT CAACTACGGT
GTGACGCCAG CAGAGGCTCA GCAGCTAGTC GATCGCCTCG GTGCAGATGC CCTGATTCTC
CATCTCAACC CACTCCAGGA ATGTATTCAG GCAGAAGGCG ATACAGACTT TCGCGGGCTA
CTGGGTCGGA TTGGGGAACT CTGCGCCGCC CTGAGCGTCC CTGTCATCGT CAAAGAAGTG
GGTAATGGCC TCTCAGCCAT GGTGGCAGCG CAACTGTTAT CCGCTGGCGT AGCGGCACTG
GATGTGGCCG GTGCGGGCGG CACCTCTTGG TCACGCGTGG AAGGCCAACG GGCAGTGGAT
CCGTTGCTGC GTCGCTTGGG CGATCGCTTT GGGGATTGGG GCATTCCCAC AGCCGAGAGT
TTGCAACAAG TCCGCCAAGT CAGTGCCACC GTACCGTTGA TTGCCTCTGG CGGGATTCGT
CACGGCCTCG ATGCAGCCAA GGCGATCGCT CTCGGCGCTG ATTTAGTCGG CCTCGCGCGC
CCCTTCTTGG TCGCGGCAGA CCAATCGGAA GAGGTACTCG ATCAGTGGAT TACCGAATTA
TTGGCCGAGC TGCGCATCGT GCGTTTCTGC ACCGACAGTG GCGATTGGGC AGCGCTGCGG
CGACCGGGGG TCTTGCGACC CTGCTGA
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| Protein sequence | MNFPIAAESS LPQRKAEHLQ LCLEAGVESP EVTTGLERYR FQHCALPNLS LQALDLGTQF
LGRSLGAPLL ISSMTGGTET AQRINCRLAI AAQKYRLAMG VGSQRVMLRQ PETTPTFDVR
DLAPDILLLA NLGAVQLNYG VTPAEAQQLV DRLGADALIL HLNPLQECIQ AEGDTDFRGL
LGRIGELCAA LSVPVIVKEV GNGLSAMVAA QLLSAGVAAL DVAGAGGTSW SRVEGQRAVD
PLLRRLGDRF GDWGIPTAES LQQVRQVSAT VPLIASGGIR HGLDAAKAIA LGADLVGLAR
PFLVAADQSE EVLDQWITEL LAELRIVRFC TDSGDWAALR RPGVLRPC
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