Gene Synpcc7942_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1918 
Symbol 
ID3775281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1993521 
End bp1994600 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content59% 
IMG OID637800360 
ProductUDP-glucose:tetrahydrobiopterin glucosyltransferase 
Protein accessionYP_400935 
Protein GI81300727 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCC ACCGTTTTCT GTTTGTATCA ACACCCGTCG GCCCCTTGGG GTCGGGGCGA 
GGGGGCGGTG TTGAACTGAC CCTGCCCAAT TTAGCCAAGG CTCTGACCCA GCGAGGGCAC
CAAGTCAGCG TGCTCGCGCC GGCTGGATCG GTGCTGCCCG ATTTGCCGCT GGAAACGGTG
CCTGGGACTT GGCAAAGCAC GGCTCAAAGT CACGGGCGCG CCACTCCTGC TGAGATTCCT
GCTGAGAGTG TTTTAGCCCG GCTCTGGGAT CGAGCTCACC AGCAGCAAGC CGACTTTGAC
CTGATCCTCA ACTTCGCCTA CGACTGGCTA CCGCTATATC TGACGCCGTT TTTCAAGACG
CCTGTCGCCC ATTTGATCAG CATGGGATCC CTATCTGAGG TGATGGATCA GGCGATCGCC
ACAAGCCTCG ATCGCTATCC CGGCAGCATC GCTGTCCACA GTCTGGCTCA GGCAGCAACC
TTTCCCTTTG GCGATCGCTG CCTTTGTATC GGCAATGCCC TTGACCTAGC AGCCTATGGG
TTTAACCCAG AGCCAGAGCC GGTCTTGGGC TGGGTAGGAC GGATTGCACC AGAAAAGGGC
CTAGAAGATG CCATTCAAGC CGCTCAACAG GCTGGCCTCC CGTTGCGGGT CTGGGGTGCC
CTGACTGAAC CCGACTATTG GCAACGACTC CAACAGCAGT TTGGCGATCG GGCCGTCAGC
TATCAGGGCT TCGTCAGTAC CGATGAGTTG CAACGTGGCT TGGGCCGCTG CCAAGGCCTG
TTAATGACCC CAAAATGGGT GGAAGCCTTT GGCAACGTCG CCATTGAAGC CCTCGCCTGT
GGCGTACCAG TGATAGCCTA TGCCCGCGGC GGACCCTTGG AAATTATTGA GCAGGGCAAG
AGTGGCTGGC TGGTAGAACC CGATCAACAG GCTGCTCTCG TCAACGCAAT TGGGCAACTG
TCTAGCCTCG ATCGCGCTTA CTGTCGAGCC CAAGCCGAAG CACGGTTTTC CTTGGCTGCG
ATGGGTCAAC GTCTAGAAGC GTGGCTACTC CCCCTCTTGT CCCGAGCCCG AGGCTTCTAG
 
Protein sequence
MTAHRFLFVS TPVGPLGSGR GGGVELTLPN LAKALTQRGH QVSVLAPAGS VLPDLPLETV 
PGTWQSTAQS HGRATPAEIP AESVLARLWD RAHQQQADFD LILNFAYDWL PLYLTPFFKT
PVAHLISMGS LSEVMDQAIA TSLDRYPGSI AVHSLAQAAT FPFGDRCLCI GNALDLAAYG
FNPEPEPVLG WVGRIAPEKG LEDAIQAAQQ AGLPLRVWGA LTEPDYWQRL QQQFGDRAVS
YQGFVSTDEL QRGLGRCQGL LMTPKWVEAF GNVAIEALAC GVPVIAYARG GPLEIIEQGK
SGWLVEPDQQ AALVNAIGQL SSLDRAYCRA QAEARFSLAA MGQRLEAWLL PLLSRARGF