| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1898 |
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| Symbol | |
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| ID | 3775261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1970822 |
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| End bp | 1972228 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637800339 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_400915 |
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| Protein GI | 81300707 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00568531 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.587637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCG GTACCCTGTT CGACAAAGTT TGGGACTTGC ACACGGTTGC CACCTTGCCC
TCGGGCCAGA CGCAGCTGTT CATTGGCCTG CACCTGATCC ACGAAGTCAC CAGCCCGCAA
GCCTTTTCGA TGCTGCGCGA TCGCGGCTTG ACCGTGAAAT TTCCGGGACG AACGGTCGCA
ACGGTTGACC ATATTGTGCC GACGGAAAAT CAGGCGCGTC CTTTTGCAGA CAGCTTGGCC
GAGGAGATGA TTGTCACCTT GGAGCGCAAC TGCCGCGAGA ATGGCATCCG CTTCTACAAC
ATCGGTTCGG GCAGTCAGGG CATCGTCCAT GTGATTGCGC CAGAGCAAGG CTTGACTCAG
CCCGGCATGA CGATCGCTTG CGGTGATAGC CATACCAGTA CTCACGGGGC GTTTGGTGCC
ATCGCTTTTG GGATTGGCAC CAGCCAAGTT CGCGATGTCT TGGCCTCACA AACGCTGGCG
CTGAGTAAGC TGAAAGTTCG CAAGATCGAA GTCAACGGCG AGCTGCAGCC CGGCGTCTAC
GCCAAGGACG TGATTCTGCA CATCATCCGT AAGCTCGGTG TCAAAGGTGG CGTCGGCTAC
GCCTACGAGT TCGCGGGTAG CACTTTCGCG GCGATGTCGA TGGAAGAACG GATGACCGTC
TGCAACATGG CGATCGAGGG CGGGGCGCGT TGCGGCTACG TCAATCCAGA TCAGATCACC
TATGACTATC TGCAAGGTCG TGAGTTTGCG CCCCAAGGCG AAGCCTGGGA TCGGGCGATC
GCTTGGTGGG AGAGCCTGCG CAGCGAAGCC GATGCGGAAT ATGACGATGT TGTTGTCTTT
GATGCGGCGG AGATTGCACC GACCGTGACT TGGGGGATTA CCCCCGGCCA AGGCATCGGG
ATCACGGAGA CCATCCCGAC GCCCGATAGT TTGCTCGATG AAGATCGGGC GGTAGCGGCG
GAAGCCTACA GCTACATGGA TTTGGAGCCT GGTGCACCGC TGCAAGGTAC GAAAGTTGAT
GTCTGTTTCA TCGGTAGTTG CACTAATGGC CGGTTGAGCG ACTTGCGCGA AGCTGCCAAG
GTTGCCCAAG GTCGCAAGGT CGCGGCGGGG ATTAAAGCCT TCGTGGTGCC CGGTTCCGAG
CGCGTCAAAC AGCAAGCCGA AGCCGAAGGC CTCGACCAAA TCTTTACGGC GGCAGGCTTT
GAGTGGCGGC AGGCCGGCTG CTCGATGTGT CTGGCGATGA ACCCGGACAA ACTGGAAGGC
CGCCAAATCA GTGCTTCTTC ATCCAACCGC AACTTCAAGG GGCGCCAAGG CTCAGCTTCG
GGTCGGACGC TTTTGATGAG TCCGGCGATG GTGGCGGCAG CAGCGATCGC GGGCGAAGTG
ACGGACGTTC GTAACTGGCT GAACTAG
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| Protein sequence | MSRGTLFDKV WDLHTVATLP SGQTQLFIGL HLIHEVTSPQ AFSMLRDRGL TVKFPGRTVA
TVDHIVPTEN QARPFADSLA EEMIVTLERN CRENGIRFYN IGSGSQGIVH VIAPEQGLTQ
PGMTIACGDS HTSTHGAFGA IAFGIGTSQV RDVLASQTLA LSKLKVRKIE VNGELQPGVY
AKDVILHIIR KLGVKGGVGY AYEFAGSTFA AMSMEERMTV CNMAIEGGAR CGYVNPDQIT
YDYLQGREFA PQGEAWDRAI AWWESLRSEA DAEYDDVVVF DAAEIAPTVT WGITPGQGIG
ITETIPTPDS LLDEDRAVAA EAYSYMDLEP GAPLQGTKVD VCFIGSCTNG RLSDLREAAK
VAQGRKVAAG IKAFVVPGSE RVKQQAEAEG LDQIFTAAGF EWRQAGCSMC LAMNPDKLEG
RQISASSSNR NFKGRQGSAS GRTLLMSPAM VAAAAIAGEV TDVRNWLN
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