Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1873 |
Symbol | |
ID | 3775236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1945396 |
End bp | 1946076 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637800314 |
Product | two component transcriptional regulator |
Protein accession | YP_400890 |
Protein GI | 81300682 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATC ATATTTTGCT CATTGAGGAT GACCCGAAGC TTCTGCTGTT TGTTGAGCAA GAACTCAGCT TAGAAGGCTA TCAAGTAACA GTTGCCAACA ACGGTCTAGA CGGTCTATCT TTAGCAAGAA GTATTCAACC CGATTTACTC ATTCTGGACT GGATGTTACC AACTCTTTCT GGAGTTGATA TCTGCTTGAG GCTACGATCG ACTGGTGTTC AAACACCAAT CATTTTATTG ACAGCTAAGG ATGAAATTTC CGATCGCGTT TCGGGGTTAA ACTCAGGGGC TGATGACTAT GTCACAAAGC CCTTCAGCAT CGAGGAGCTG CTGGCACGAG TTAAGGCGCA ATTACGTCGG GTCAATCCAG AAGAGCCCGA TCGCCTGCAG TTTGCTGATG TATCACTCCA TCGTCTAACC CATGAAGTTT ATCGAGGGAG TCAACGACTA GAGCTGACAG CTAAGGAGTT TGATCTGCTC GAGTTTCTCC TAAGACATGC TCGACAAGTC GTTACCCGTG ACCAAATTCT TGAGCAAGTT TGGGGGTATG ACTTCATGGG CGAGTCTAAT ATTATTGAAG TCTATATTCG AGCATTGCGA TTAAAGCTAG AAGCCTCAAA TCCGCAACGA ATTTTACAGA CAGTGCGAGG CGTTGGCTAT GTGATTCGCG ACTATCCCTA A
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Protein sequence | MNNHILLIED DPKLLLFVEQ ELSLEGYQVT VANNGLDGLS LARSIQPDLL ILDWMLPTLS GVDICLRLRS TGVQTPIILL TAKDEISDRV SGLNSGADDY VTKPFSIEEL LARVKAQLRR VNPEEPDRLQ FADVSLHRLT HEVYRGSQRL ELTAKEFDLL EFLLRHARQV VTRDQILEQV WGYDFMGESN IIEVYIRALR LKLEASNPQR ILQTVRGVGY VIRDYP
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