| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1867 |
|---|
| Symbol | |
|---|
| ID | 3775230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1936937 |
|---|
| End bp | 1937818 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637800308 |
|---|
| Product | deoxyribodipyrimidine photo-lyase family protein |
|---|
| Protein accession | YP_400884 |
|---|
| Protein GI | 81300676 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.107933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCAG AACCCAGCGA TGGCCATGAT CTGCGGCGAT CTTTTCGCGA TCGCCAAGAA
CTGATCGACT ATCTGCAGCA GCAATTTCCA GAAGCGGCGG CCGTGGATGC CCAGGTCAGT
CCCATCCCAG GCGGCTATCA AGCCGCGATC GCTCAGCTCG AGGCGATCAA CCCGCTGCGC
TATGGCAAAA GCCGCAACTT TTTGGACGGT GCAGTGACAC GCCTGTCGCC CTACATTCGC
CACGGCGTTC TTAGTTTGGC AACCGTCCGC GATCGCGTCT TGGCTCAAAT TCGCCAGCGC
AGTGATGGCG AAAAACTGAT TACGGAACTG GCTTGGCGCG ACTACTGGCA ACGGATCTAT
TGGGAGTGGG GCGATCGCAT TTGGCGCGAT CGTGAGCCCT ACAAAACCGG CTGGGACAGC
CAACAATACA GCGAGGCGCT TCCGCCTGAC CTACAAGCGG CTGAGACAGG CTTAGCCTGC
ATGGATCGCT TCAGTCGTGA ACTGAAGGAG ACTGGATACC TGCATAACCA TGCCCGCATG
TGGATGGCGG CCTATCTGGT GCATTGGCGG CGCATTCGCT GGCAGGCGGG TGCGCGCTGG
TTTCTTCAGC ATTTACTCGA TGGCGACCCC GCCAGCAATA ACCTCTCGTG GCAGTGGGTA
GCCAGCACCT TCAGCACCAA GCCCTACTGG TTTAACCGCG AGAACCTGCA GCGCTACAAC
GGCGATCGCG ATTGTCAGGA TTGCCCCAGC CGCGATCGCT GTCCCTTTGA CGGCAGCTAC
GACGAGCTCG CCGATCAGCT CTTTCCCAAG GCCGAATTTC GCGACCAACC CCGCCAAGGC
GGACGCTGGC ACCGCGATCG CTCTAACTCT CGCCAGCGCT AA
|
|---|
| Protein sequence | MSSEPSDGHD LRRSFRDRQE LIDYLQQQFP EAAAVDAQVS PIPGGYQAAI AQLEAINPLR
YGKSRNFLDG AVTRLSPYIR HGVLSLATVR DRVLAQIRQR SDGEKLITEL AWRDYWQRIY
WEWGDRIWRD REPYKTGWDS QQYSEALPPD LQAAETGLAC MDRFSRELKE TGYLHNHARM
WMAAYLVHWR RIRWQAGARW FLQHLLDGDP ASNNLSWQWV ASTFSTKPYW FNRENLQRYN
GDRDCQDCPS RDRCPFDGSY DELADQLFPK AEFRDQPRQG GRWHRDRSNS RQR
|
|---|
| |