Gene Synpcc7942_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1855 
Symbol 
ID3775218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1923883 
End bp1925253 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content47% 
IMG OID637800296 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_400872 
Protein GI81300664 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1797] Cobyrinic acid a,c-diamide synthase 
TIGRFAM ID[TIGR00379] cobyrinic acid a,c-diamide synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0710806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTCA TTATTGCTGG TGAACGTAGC GGTGTTGGCA AAACTACTAC GACTCTCACC 
TTACTCGCTG CCCTGAAAGC TCGTCAGGCA TCTGTTCAAT CTTTCAAAGT TGGACCTGAC
TACATTGACC CGATGTTTCA TCGATTTGTG ACGGGTCGAG ATTGTCGAAA TTTAGATCCA
ATCCTGACTG ATGAGGATTA CGTTCAACAT TGCTTTCAGC AGCACAGCCA AACCGCAGAC
TACACTTTAG TTGAAGGTGT GATGGGCTTG TTTGATGGTC TAACTGGCAA AACAGATACT
GCCAGTACTG CCCATATCGC TAGGATTCTC AATCTTCCAA TCCTCCTAGT CTTGAACTGC
AGTAGTACTG CTCGGTCGAT CGCTGCGATC GCTTATGGCT ATCAAAACTT TGATTCTCGC
CTCAAGATTG CTGGGCTTGT CCTCAATCGG GTTGGCAGCG ATCGTCATTT AGAGTTACTG
AAAGATGCTT TAGAGCCCTT AGAAATTCCA ATTCTCGGTG TTCTAAGGAG ACAGGATGAG
ATTCAAATTC CCGATCGCCA TTTGGGCCTA ATTCCAACAT CGGAGCTCCC CCACTTACAA
TCGGTCATCG ATCGTCTTGC TGTTTTGGGT CAACAGTGTT TTGATTGGAA TCGACTAGAA
CCATTGCTTT CAAATTCTGA TTTAAATAGC ACGGCTTTCA AGTCTACCAC CCCATCAATC
TCTCTAAAGT CATCAGTTCC CATTGCGATC GCTCGAGATC GGGCCTTTAA TTTCTACTAT
GCTGACAACT TCGATCTACT ACGTGCTGCT GGAGCAGAGT TAATTGAGTG GAGTCCCCTT
CAAGATCGAC AACTCCCAGC AGGTGTCCAA GGACTCTATC TAGGTGGTGG ATTTCCTGAG
GTTTTTGCAG CTGAGTTGAG TGATAATTTA CTCGCACGTC AAGCCGTGCA GACTGCGATC
ACTCAAGGGA TTCCCTGCTA TGCCGAATGT GGCGGTTTGA TGTATCTCTG TCAGCACATC
ATTGACTTTG AGCAGACGCA ATATCCAATG GTTGGAGCGA TCGCAGCAAC AGCACAAATG
GGTTCTCGCT TAACCTTGGG CTATCGAGAA GCAACAGCCC AACAGGCGAG TCCTTTGCTG
CAAAAAGGAC AGGTAGTTTG GGGTCATGAA TTCCACCGTT CCAGCCTGCG AGAGCCGATC
GCACAGCCGC TCTTCCAGCT CCAAAACTTT GATGGATCTC TGCACTATGG AGAAGGCTAC
AGTCAGCCCA ATCTCCATGC CTCCTATCTC CATCTTCACT TTGGAGGCAA GCCCTGGTTA
ATTCAGAATT TTTTGCAAGC TTGTCAGCAA GCAACTGCCT TAAGTCGATA G
 
Protein sequence
MALIIAGERS GVGKTTTTLT LLAALKARQA SVQSFKVGPD YIDPMFHRFV TGRDCRNLDP 
ILTDEDYVQH CFQQHSQTAD YTLVEGVMGL FDGLTGKTDT ASTAHIARIL NLPILLVLNC
SSTARSIAAI AYGYQNFDSR LKIAGLVLNR VGSDRHLELL KDALEPLEIP ILGVLRRQDE
IQIPDRHLGL IPTSELPHLQ SVIDRLAVLG QQCFDWNRLE PLLSNSDLNS TAFKSTTPSI
SLKSSVPIAI ARDRAFNFYY ADNFDLLRAA GAELIEWSPL QDRQLPAGVQ GLYLGGGFPE
VFAAELSDNL LARQAVQTAI TQGIPCYAEC GGLMYLCQHI IDFEQTQYPM VGAIAATAQM
GSRLTLGYRE ATAQQASPLL QKGQVVWGHE FHRSSLREPI AQPLFQLQNF DGSLHYGEGY
SQPNLHASYL HLHFGGKPWL IQNFLQACQQ ATALSR