Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1850 |
Symbol | |
ID | 3774425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1917870 |
End bp | 1919099 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800291 |
Product | precorrin-6Y C5,15-methyltransferase (decarboxylating) |
Protein accession | YP_400867 |
Protein GI | 81300659 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2241] Precorrin-6B methylase 1 [COG2242] Precorrin-6B methylase 2 |
TIGRFAM ID | [TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit [TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.817555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.537899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACTC CTTCCTTAAC TCCGTGGCTA TCGATCGTTG GGATTAGCGA AGAAGGATGG CTGGCCCTAA CCCCGATCGC ACAGCAATGT ATCCTGCAAG CCGACATTCT CGTGGGCAGC GATCGCCATT TTGATCTTCT GCCTTCCCTG CCAGGTGCGG AACAATGGCG CTGGGGATCC CCGTTTTCCG CCACGATCAC CCAAATCCTC GAGCGGCGCG GCCAATCTAT TTGCATCCTC GCCAGTGGCG ACCCAATGTG CTACGGCGTT GGGAGTTTGC TGGCACAACG CTTGCCGCTG ACTGAACTCC AGATTCTGCC TGCACCCTCG GCCTTTAGTT TGGCCTGCTC TCGCTTGGGC TGGGCTTTGC CGGAAGTGGA AACCCTGAGC CTTTGCGGTC GCGATCCAGC GTTACTTAAC GCGCTACTTT ATCCTGGCGC CAAGATTTTG GCCCTCAGTG CCGATCGCTC GACTCCAGCC ACGATCGCAG AGCAACTCTG TCAGCAGGGC TGGGGGTCAA GTCGGCTCAC GGTTTTAGAA CATCTGGGCG GCCCTAAGGA GCGAAAAATT AGTGAAATAG CCGAGCACTG GTCTCAGCCC ACGATCGCCT CTCTCAACAC CGTGGCGATT GAATGCCATG CCCGCGATCG CGACTTGATT GTGCCGCCCC GCCTGACTGG ACTGCCTGAT GCGGCCTACC ACCATGATGG GCAACTGACC AAACGGGAAG TGCGAGCGAT CACGCTAGCT GCGCTAGCTC CCCTGCCCGG CCAACTGCTC TGGGATGTGG GTGCCGGCTG TGGGTCGATC GGCATTGAAT GGATGCGTAG CGATCGCCGC TGTCGAGCGA TCGCCATTGA GCAGCATCCG CAGCGGCTGC AAATCATTAC ACAGAATGCG ATCGCCCTCG GGGTTCCGAA CCTGCAAGTG GTTGCCGGTT CAGCACCGGC TACGCTGAGT GGCTTGCCCC AACCGGATGC CATCTTCATC GGTGGCGGTG TCACTGCTCC AGGTGTGCTC GATCAATGCT GGCAAGCGCT GCCGATGGGT GGGCGGCTAG TTGTTAACGC CGTTACCCTC GAAAGCGAGC AAGTCGTTTT GGCTGGACAG CAGCGCTGGG GGGGAGATTT AATCCGTGTG GCGGTGCAGC GAGCGGAACC GATCGGCCGC TTTCTCGGCT GGAAATCGCT GGCACCGATC ACGCAATGGA CGGTCAAAAA AACAGCCTAG
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Protein sequence | MDTPSLTPWL SIVGISEEGW LALTPIAQQC ILQADILVGS DRHFDLLPSL PGAEQWRWGS PFSATITQIL ERRGQSICIL ASGDPMCYGV GSLLAQRLPL TELQILPAPS AFSLACSRLG WALPEVETLS LCGRDPALLN ALLYPGAKIL ALSADRSTPA TIAEQLCQQG WGSSRLTVLE HLGGPKERKI SEIAEHWSQP TIASLNTVAI ECHARDRDLI VPPRLTGLPD AAYHHDGQLT KREVRAITLA ALAPLPGQLL WDVGAGCGSI GIEWMRSDRR CRAIAIEQHP QRLQIITQNA IALGVPNLQV VAGSAPATLS GLPQPDAIFI GGGVTAPGVL DQCWQALPMG GRLVVNAVTL ESEQVVLAGQ QRWGGDLIRV AVQRAEPIGR FLGWKSLAPI TQWTVKKTA
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