| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1816 |
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| Symbol | |
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| ID | 3774391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1888444 |
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| End bp | 1891377 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637800257 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_400833 |
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| Protein GI | 81300625 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.218789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.39116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC GCCGCCAATT CCTGTTGTTT GGAGTGGGGA CAACCTTTAC AGCGATCGCT
GCGATCTCCT TATCGGATGT CATTACCAAT ACCCGACTGA GTGAGTCCAG TCGTGAGGAG
GTGCAATCCC TGCTGCAGCG TGAGCAAGAG AGCATCCTGT CGCGAACGTA CACCGTGGTT
CGGGTGCAGG GCACCTCGAT CGAAAAGCAA CTCAGTCGAC AGATCCAGGT TCTCGATGAA
GCCCTCCAAC GAGCCGGCGG CCTCAGGACT GGCTCTCGCC TAGTGCGCTG GCAAGCTAAG
AATCAATACA CAGGCGCCAT ACAGCCTGTT GAGTTGCCGG AACTTCAGTT GGGTGGCCGC
TGGCTCGATC AGGTTAGTCG CTTTGATCAG GCAGTGCCAG TGATTGACAC AGTGTCTCGG
CAAATGGGCG GCACTGTCAC GATCTTCCAG CGGATCAACG ATCGCGGTGA CATGCTACGG
GTCGCAACCA CCGTCCCTAA TCAGGATAAG CAGCGGGCGA TCGGCACCTA CATCCCTGTG
ACCAATCCCA GTGGCGATCC CAACCCTGTG ATTGCAGCAG TTTTGAAAGG TCAGACCTAT
CGCGGGCCAG CCTACATTGT CAATGATTGG TACATCGCCA TCTATCAGCC GCTCAAAGAT
GCTCAGGGGC GGGTTATCGG GATGATCTAT GCCGGTCAAC GTCAGGATCA AACCGGTGAA
CTAGCGCGCT CTTTTCAGGA TTTGCGCTTT GGTCAAACCG GATCAGCTTT TGTTTTCCTG
GGGCAGGGCA GCCAACGGGG CGAGACCATT CTGACCAGTG ACCCATCGCT CCAGAAAAAA
AACTTTTGGG ATGCCAAAGA CGCCTCAGGG CAGTTTTTTC TGCGAACTTC GATCGCAGAT
GCCATCCGCC AACCGGGTGC TTTTATTCGC GTTCGCTACT TGGCTCGCCC TTGGACGGAG
GGGCTGCAAT CGACGCAACC GGCTCGCCAA GAACAGATGC TACTGGTCTA TTACCGCCCT
TGGAACTGGG TTATTGGCAT TCGCCAGGAT GAGCAGGAAT TTGCGGAACC CTTCCGCCGC
CTAGAGGCTA TTCAGCAGCG ATCGCTCTAC ATTCAGTTAC TGCTCGGTGT CATCATTGCG
GTGCTCGGCG CAATCGCCGC CCGCGGTTGG GCTGCCCACT TAGGAATGCG CATTGAGCAG
TTAGCCCATG CTGCCGATGC CATGGCCAGC GGCCAGCTCC AGCAACAAAT TCCCACCAGT
GGTCGCGATG AACTCACTGT GCTGGCCCAA GCCTTCAACC GGATGGCGGT TACACTGCGG
GAGTTGCTGG TCAGTTTGGA GCATCGCGTC CAAGAACGTA CGGCGGCTCT CCGAGAAACT
AACGATCGCC TCGAACAGGC CCGTGAGCAG GCCGAAGCTG CAAACCAGGC TAAGAGTGCA
TTTCTAGCCA ACATGAGCCA CGAGTTGCGC ACTCCCCTCA ATGCCATCAT TGGCTACAGC
GAAATGATGA TGGAAGAGGC AGAAGACGGC ATCGAGGTCG AAGAACTCCT GCCCGACTTC
CGCAAGATCA ACAATGCAGG CAAACACTTG CTGGAGCTGA TCAACAGCAT TCTGGACCTC
TCCAAAATTG AAGCGGGTCG CATGGAGCTT TACTTAGAAA GCTTCTCGCT GCCCGAGCTG
ATCAATGGTG TGAAATCGAT TATCAAGCCC TTAATTGAAA AAAATCAGAA TCAGCTGTTG
GTGGACTGCC CAGCCGATAT AGGGCTGATG ACTGCTGATG TCACGAAGCT GCGGCAAACC
TTGCTCAACC TTCTGTCTAA TGCCAGCAAA TTTACTCACC AAGGCACGAT TCAGCTGCAG
GTTGCTGCCC AGGGGGATCA GGTGGTCTTC AAGGTGGTTG ATAGTGGCAT TGGTATGTCA
CCGGAGCAGA TCGATCGCAT TTTTGAGGCG TTTGCCCAAG CAGATGATTC CACGACACGG
AAATTCGGAG GCACAGGTCT TGGGCTTTCG ATTAGCCGCC ATTTCATAGA AATGATGGGA
GGCAAAATTA CGGTTGAGAG CGTTCTCGGG GAAGGCAGTA CGTTCACCAT TACCCTGCCG
CGCCAAGTGC AACCGCCGCA GTCGATCCCT GCGGTTGATC CAGTCCTGAC TGATGAGGCG
ATCGCAACGG CCACTGAACA GGAAGATCAA AACCAGCCTG TGGTCCTCGT TGTGGATGAT
GAACCTAGTG CCCGCGAGTT GTTGCGCCGC ATGCTGGAAA AGGAAGGCTA TCGCGTCGTT
ACGGCAGCAG GGGGAGCTGA AGGGTTGCAG CGAGCGCAGG AACTGCGCCC TGCCCTGATC
ACCCTCGATT TGATGATGCC CCAGGTGGAT GGTTGGTCAG TGCTAACCGC TCTCAAAGCC
GATCCAATGC TGGCGGAGAT TCCAGTGGTG ATGGTGAGCA TGGTGGAAGG GCGATCGCTC
TCCTATGCCC TCGGTGCAGC TGACTACCTC CACAAACCAA TTGATCGCGA CCAGTTGCGG
CGGATCCTGG AGCGCTATAC CCACCCCGAT CGCCAGCCGC TGGCACTGGT TATTGAAGAC
GACCCAGTCA ACCGATCGCT GCTGCGGCAA TTGCTCGAGC GGGATGGCTG GCAGGTCGCA
GAAGCCAACC AAGGGCAACA AGGCCTAGCT GTTTTGGAGT CGCTGGAGCA GCCGCCCGAC
CTGATCTTGC TGGATTTGAT GATGCCCCAG ATGGATGGCT TTGCCTTCGT CGACGCGCTG
CGAGCTAACG GTAACTGGCA AACACTGCCG GTGATTGTGG TGACGGCTAA AGATCTGACG
GAACAGGATC GTCAGCGCCT GCAAGGGCGG GTTAGCCAGG TGATTGCCAA GGGGAATTTG
GCGATCGATC GACTCCTGGC GGAAATTCGC CAAGTGGGGG CCAACCGTGT CTGA
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| Protein sequence | MKLRRQFLLF GVGTTFTAIA AISLSDVITN TRLSESSREE VQSLLQREQE SILSRTYTVV
RVQGTSIEKQ LSRQIQVLDE ALQRAGGLRT GSRLVRWQAK NQYTGAIQPV ELPELQLGGR
WLDQVSRFDQ AVPVIDTVSR QMGGTVTIFQ RINDRGDMLR VATTVPNQDK QRAIGTYIPV
TNPSGDPNPV IAAVLKGQTY RGPAYIVNDW YIAIYQPLKD AQGRVIGMIY AGQRQDQTGE
LARSFQDLRF GQTGSAFVFL GQGSQRGETI LTSDPSLQKK NFWDAKDASG QFFLRTSIAD
AIRQPGAFIR VRYLARPWTE GLQSTQPARQ EQMLLVYYRP WNWVIGIRQD EQEFAEPFRR
LEAIQQRSLY IQLLLGVIIA VLGAIAARGW AAHLGMRIEQ LAHAADAMAS GQLQQQIPTS
GRDELTVLAQ AFNRMAVTLR ELLVSLEHRV QERTAALRET NDRLEQAREQ AEAANQAKSA
FLANMSHELR TPLNAIIGYS EMMMEEAEDG IEVEELLPDF RKINNAGKHL LELINSILDL
SKIEAGRMEL YLESFSLPEL INGVKSIIKP LIEKNQNQLL VDCPADIGLM TADVTKLRQT
LLNLLSNASK FTHQGTIQLQ VAAQGDQVVF KVVDSGIGMS PEQIDRIFEA FAQADDSTTR
KFGGTGLGLS ISRHFIEMMG GKITVESVLG EGSTFTITLP RQVQPPQSIP AVDPVLTDEA
IATATEQEDQ NQPVVLVVDD EPSARELLRR MLEKEGYRVV TAAGGAEGLQ RAQELRPALI
TLDLMMPQVD GWSVLTALKA DPMLAEIPVV MVSMVEGRSL SYALGAADYL HKPIDRDQLR
RILERYTHPD RQPLALVIED DPVNRSLLRQ LLERDGWQVA EANQGQQGLA VLESLEQPPD
LILLDLMMPQ MDGFAFVDAL RANGNWQTLP VIVVTAKDLT EQDRQRLQGR VSQVIAKGNL
AIDRLLAEIR QVGANRV
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