Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1793 |
Symbol | |
ID | 3774368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1864440 |
End bp | 1864763 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637800234 |
Product | thioredoxin |
Protein accession | YP_400810 |
Protein GI | 81300602 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.99578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00274383 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCTGCAG CAACTGAGCT GAATGATCAG CAGTTTGAAT CTGCCGTTCT GAAAGCCCCA GGATTGGTTC TCGTCGATTT TTGGGCGCCT TGGTGCGGCC CTTGTCGCCT AATTGCACCG CTGATGGACT GGGCCGCCCA GACCTATGCC GATCAACTCA CGGTCTACAA GCTGGAAGTG GATCCGAATC CCGAGACGGT AGCTCGCTAT CAAGTTCAGG GCATTCCGAC GCTGTTGCTG TTCCAAAACG GTGAACTGGT AGAGCGCGTC GAAGGTGCCA TTGGACGCGA TCGCATTCAG ACCCTGATCA ACGCCCATCT CTAA
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Protein sequence | MSAATELNDQ QFESAVLKAP GLVLVDFWAP WCGPCRLIAP LMDWAAQTYA DQLTVYKLEV DPNPETVARY QVQGIPTLLL FQNGELVERV EGAIGRDRIQ TLINAHL
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