Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1738 |
Symbol | |
ID | 3775438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1808413 |
End bp | 1809672 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800177 |
Product | cysteine desulfurase |
Protein accession | YP_400755 |
Protein GI | 81300547 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.948748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCGA TCGCCCTGAC CAATCTTGCG ACTGAGGTTC GTGCCGACTT TCCGATCCTG CAGCAGCAGG TCAACGGTCA GCCCTTGGTC TATCTCGACA ATGCGGCCAC TTCGCAAAAA CCGAGAGCGG TGATCCAGTC CCTCGTCGAT TACTACGAGG GCTACAACAG CAACGTCCAT CGCGGCGTCC ACACCCTGAG CGGCAAGGCA ACGGATGCCT ACGAAGGGGC ACGGCAAAAG GTGGCGCGGT TCATCAACGC CAAGACGGAA CAGGAGATTG TCTACACCCG CAATGCCAGC GAGGCGATCA ACCTCGTCGC CTACAGCTTC GGCATGAACT TTCTCCAAGC CGGTGATGAG ATCATCCTCT CGGCGATGGA GCACCACAGC AACCTAATCC CTTGGCAGTT TGTGGCAGCG AAAACAGGAG CGGCGCTGAA ATTCGTCGGG GTGACTGAGA CCGGTCAGTT CGACCTCGAG CAGTTCCGTA GCCTCCTCAG CGATCGCACC AAACTGGTGT CGGTCGTCCA TGTTTCTAAT ACGCTAGGTT GCTGCAATCC GGTCACGGAA ATTTGTCAGC TCGCCCATGC CAAGGGTGCG CGGGTGTTGA TTGATGCCTG CCAAAGTCTT CCCCACCAGG CGATCGATGT TCAGGCGATC GATTGCGATT GGCTGGTTGG CTCTGGCCAC AAAATGTGTG CACCGACGGG CATTGGTTTC CTCTACGGCA AGCTCGACCT GTTGCGTCAA ATGCCGCCCT TCCTCGGCGG TGGTGAAATG ATCGCCGATG TCTTCCTTGA TCACGCAACT TACGCCGATC TTCCTCACAA ATTCGAAGCA GGAACACCGG CAATTGGAGA AGCGATCGCA TTGGGCGCGG CGATTGATTA TCTAACCGCG ATCGGCATGG ATCGCATTCA CGCCTACGAA CAGCAGCTAA CCCAACACCT CTTCCAACGG CTGGCAGAAA TTCCTGAGCT GACCGTCTAC GGACCTACGC CGGAGCAAGA TCGCGATCGC GCTGCCCTCG CCGCCTTTAC CGCCGGTGCA GTCCATCCCC ACGATCTCTC GACCATCCTC GACCAGTCAG GCATTGCGAT TCGAGCCGGG CATCACTGCA CTCAGCCACT GCACCGTGAA TTACAAGTCC AATCAACGGC GCGGGCTAGT TGTTATTTCT ACAATACGAC TGACGAGATC GATCGTCTGA TCGAGTCTCT CAAGGAAGCC GTTGAGTTCT TTGGAGCGAT TTTCAGCTAG
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Protein sequence | MTAIALTNLA TEVRADFPIL QQQVNGQPLV YLDNAATSQK PRAVIQSLVD YYEGYNSNVH RGVHTLSGKA TDAYEGARQK VARFINAKTE QEIVYTRNAS EAINLVAYSF GMNFLQAGDE IILSAMEHHS NLIPWQFVAA KTGAALKFVG VTETGQFDLE QFRSLLSDRT KLVSVVHVSN TLGCCNPVTE ICQLAHAKGA RVLIDACQSL PHQAIDVQAI DCDWLVGSGH KMCAPTGIGF LYGKLDLLRQ MPPFLGGGEM IADVFLDHAT YADLPHKFEA GTPAIGEAIA LGAAIDYLTA IGMDRIHAYE QQLTQHLFQR LAEIPELTVY GPTPEQDRDR AALAAFTAGA VHPHDLSTIL DQSGIAIRAG HHCTQPLHRE LQVQSTARAS CYFYNTTDEI DRLIESLKEA VEFFGAIFS
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