| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1725 |
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| Symbol | |
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| ID | 3775425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1797616 |
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| End bp | 1799067 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637800164 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_400742 |
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| Protein GI | 81300534 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.809338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCCA AAATGATTGA TTCAGCCCCG AGCCAAACGC TCTATGAAGC CGTTGCCGAT
CGCATTCATC GCTTGATTCT TGAAGGAACG CTCCAGCCGG GCGATCGCTT GCCCTCCGTT
CGCAAGCTCC ATCGCCAGTG GTCCATCAGT ATCTCAACGG TGCTGGAAGC CTATCGCCTT
TTGGAAGATC GGGGCTTAAT CCAGGCACGA CCTCAGTCGG GCTATTTCGT CAAATCTGCC
CTGCATTCAC TGCCCGAAGA GCCTAGTTTT AGCCCTCCTA CAGCGGTGAA TCACCCAGTT
GAGATTTCTC TTGCTTTTCG CGTTAGCAAC GCCGTCTGTG ATTCCCAAAC AGTCGGTCTG
GGGTCTGCGA TCGCCGGGAC TGAACTGCTC CCCATTGCAA CGCTTAACCG CTTGATGGGA
CAAGTTCTGC GTACCCAACC GGCAGCAGCC CATTGCTACG GTTCACCCCA AGGGTGTGAG
GAATTACGTC ATGAAGTGGC TAGGCGGCTA TTGGATGCAG GATGTTCGGC CACACCGGAT
CAGATTGTGA TCACAAACGG CACCACAGAA GCCCTCTATC TTTCCCTCAA AGCCATTACT
AAGCCGGGTG ACACTGTTGC GATTGAATCT CCTACCTACC ACCTTTTACT TGAGACTCTT
TCAGCCTTAC ATCTCAAAGC CCTAGAGCTA CCAACCCATC CCCAAGAGGG CATTTCACTC
GAGCATCTCG AAGAAGCGTT GAAAACTCGA AAAGTTGTCG CCTGTGTCTT AATTACCAAC
TTTAGTAACC CCTTGGGAAG CTGTATGAGT GACAGCAAGA AGAAGCAAAT TATTGATCTT
CTTAATCATT GCGATATTCC CCTAATTGAA GATGACATCT ACGGCGAACT TCACTTTGAG
GGTAGTCGTC CGAAAGCAAT TAAAGCCCTA GATCAAGATG GACGGGTTCT CTACTGCGCT
TCTGTAAGTA AAACACTCTC ACCTGGATTA AGAGTGGGCT GGGTGGTTGC TGGCAGATAT
CAGCTCAAGG TTGAGCAGCT AAAAATGACA ATGAATTACA TGTCCGCGAT CGCACCGCAA
CTCACGACTG CCGCTTTCCT GGCGAATGGT GGCTACGATC GCCATCTGCG CCGACTCCGG
CAGGCTCATC ACTCGCAAAT GCAAAGTATG ACCCAAGCCA TCTGTGATTA TTTTCCAGCC
ATCACTAAGG TCTCGCGGCC CAAGGGTGGT TATGTCCTCT GGATTGAAAT GCCGCCACAC
GTCGATACCC TACAGCTCTA CGAAGTAGCT CGCCAGCGAC AAATCATCAT TGCGCCCGGC
GTGATGTTTT CTCCGTCCGG CAACTATCGC CATTGTTTTC GGCTCAACTT TGGCCTGCCG
TTTACTGAAG CCATTCATCA GGCGCTTCAA ACGCTTGGGC AGCTCTTGCA TGCTCAGATC
CAATCGTCTT GA
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| Protein sequence | MEAKMIDSAP SQTLYEAVAD RIHRLILEGT LQPGDRLPSV RKLHRQWSIS ISTVLEAYRL
LEDRGLIQAR PQSGYFVKSA LHSLPEEPSF SPPTAVNHPV EISLAFRVSN AVCDSQTVGL
GSAIAGTELL PIATLNRLMG QVLRTQPAAA HCYGSPQGCE ELRHEVARRL LDAGCSATPD
QIVITNGTTE ALYLSLKAIT KPGDTVAIES PTYHLLLETL SALHLKALEL PTHPQEGISL
EHLEEALKTR KVVACVLITN FSNPLGSCMS DSKKKQIIDL LNHCDIPLIE DDIYGELHFE
GSRPKAIKAL DQDGRVLYCA SVSKTLSPGL RVGWVVAGRY QLKVEQLKMT MNYMSAIAPQ
LTTAAFLANG GYDRHLRRLR QAHHSQMQSM TQAICDYFPA ITKVSRPKGG YVLWIEMPPH
VDTLQLYEVA RQRQIIIAPG VMFSPSGNYR HCFRLNFGLP FTEAIHQALQ TLGQLLHAQI
QSS
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