Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1721 |
Symbol | |
ID | 3775421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1793212 |
End bp | 1793916 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637800160 |
Product | HEAT repeat-containing PBS lyase |
Protein accession | YP_400738 |
Protein GI | 81300530 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCGA TTGACCTTGC CCAGCTTGCG AGCCAACTGG AGAGTGAGCA ATCTCGCGAT CGCCTGATTG CGCTGGCTTC TCTGCGGGAC GTTGAGGCTG AGGATGCTGT CCCTTTGATC AAAAAAGTAT TAGCTGATGA AAGCATCCAA GTGCGATCGA TGGCCGTGTT TGCGTTGGGG ATCAAACAGA CTGCCGAGTG CCTACCGTTG TTGCTGGAAG TTTTAGAAAC CGAAGACGAC TACGGCATTC GGGCGAGTGC GGCTGGTGCT TTAGGCTATC TCCAAGATGA TCAGGCCCTA GAACCGCTAC TGCGCGTGTT CTATGAAGAC ACGTCTTGGC TAGTGCGTTT TAGTGCTGCG GTAGCCCTCG GTAATCTGCA AAATCCTCGA GCTCGTGACG CTCTGATTCA GGCCTTGGAT AGTGAGGAAG TCCTGCTGCA CCAGGCTGCG ATCGCGGCCC TCGGTGAAAT TGGTGCTGTC GATGCCGTCG ATCAGCTGTT GCGCTTTGTG GCTGCTGAAG ACTGGCTGGT TCGTCAGCGC TTGGCAGAGG CACTGGGAAA GCTCCCCTGC GACAAGGCCT TATCAGCGCT GCGCTACCTC GTTAAAGATA GCCATCCTCA AGTTTCTGCG GCGGCAGAAC AAGCCTTACA ACAACTGGAA ACAGGAACAA CGACTCAGCC TGAGAGTGAT GACTTCCCAG GATGA
|
Protein sequence | MDAIDLAQLA SQLESEQSRD RLIALASLRD VEAEDAVPLI KKVLADESIQ VRSMAVFALG IKQTAECLPL LLEVLETEDD YGIRASAAGA LGYLQDDQAL EPLLRVFYED TSWLVRFSAA VALGNLQNPR ARDALIQALD SEEVLLHQAA IAALGEIGAV DAVDQLLRFV AAEDWLVRQR LAEALGKLPC DKALSALRYL VKDSHPQVSA AAEQALQQLE TGTTTQPESD DFPG
|
| |