Gene Synpcc7942_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1701 
Symbol 
ID3775400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1767953 
End bp1768489 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content57% 
IMG OID637800139 
Producthypothetical protein 
Protein accessionYP_400718 
Protein GI81300510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.395099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATTT TCGACGATGT CAGCCGCTTC TTAGAGGACC GTCTTGAAGA GTATCTGCGT 
GACAATCCCC ATCTCGAGTT GCAGGCCTTG GCAGAACAGC TCGATGAACA GGCCAGCGAT
ACGCTCCGCC TGATCAAGCA GCTCCAGAGT CAAGAGCAGG CCTTGCAAGA GAAGATTTTG
GCGACGGCGC GCGATGTGCA ACTGTGGCAC GAACGCATCG CGAAGGCTCA AGCCAAGGGA
CGGTTAGATT TGGTGGAACC CGCCCAAGCC CGCGAAGCCG CTTTGCTGCG GCAGGGCAAT
CAGCTCTGGG GCCAAATGAC CGCTGTTAAG CAACAGATTG AACAGAGCCA ACAGCTTTAT
CGGCAAATGC AAGTGCGACA GCAAGAGGTC AAAGAGCGAC TCGCAACCGT TCAAGCCAGC
CCTGCGACTT GGGGAACCCC ACCCACCGCT GACCCTAACG ACCCGCTCGA AGCTGCTTTC
CACGCCTGGG ATATTGAGGA AGAGCTCAAT GCTCTCAAGC GCAATCTCTC GCGTTAA
 
Protein sequence
MSIFDDVSRF LEDRLEEYLR DNPHLELQAL AEQLDEQASD TLRLIKQLQS QEQALQEKIL 
ATARDVQLWH ERIAKAQAKG RLDLVEPAQA REAALLRQGN QLWGQMTAVK QQIEQSQQLY
RQMQVRQQEV KERLATVQAS PATWGTPPTA DPNDPLEAAF HAWDIEEELN ALKRNLSR