Gene Synpcc7942_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1671 
Symbol 
ID3775743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1741836 
End bp1742447 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content59% 
IMG OID637800109 
Productpotassium-transporting ATPase, C subunit 
Protein accessionYP_400688 
Protein GI81300480 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGC GCAACTTCCG TCCAGCCCTG CGAATCACCC TAGTTTTCTG GCTACTGACT 
GCGGTGATCT ATCCCTTGGT TCTGTTCGTG ATTGGCCAAC TCGTCTTCCC ATTCCAAGCC
AATGGCAGTT TGCTGACCGA TGCCCAAGGA ACGGTGGTCG GCTCGCAACT GATCGGTCAG
CCCTTCCAGA GCGATCGCTA TTTCTGGGGA CGCCCCAGTG CGATCGCCTA CGCCACCGAT
CCTGCCGATC GACAGACTGG CATCTCCGGC AACCAACACC TCGGACCCAC CAATCCACAG
CTGCGCGATC GCATTGCTGC AGAAGCTCGA CGGTTGCAGG CAGCAGGATT GTCGTCAATT
CCCAGCGATT TACTCTACAG CTCCGCCTCG GGGCTCGATC CCCATATCTC CTCGGCGGCG
GCTCAAGCCC AGGTTGCTCG TGTGGCCGCC GCTCGCCAGC GATCGCCCGA AGTGATTGCC
GAACTCGTCG AGTGCTACCG CGATCGCCGG GTTTTCGGCC TGATCGGCGG TACAGGAATT
AACGTCTTGC AACTTAACCG GGCCCTCGAC TTACCGCAAC CGTCAACCAA CCAAATTTGC
CCGAAGCTCT AG
 
Protein sequence
MLLRNFRPAL RITLVFWLLT AVIYPLVLFV IGQLVFPFQA NGSLLTDAQG TVVGSQLIGQ 
PFQSDRYFWG RPSAIAYATD PADRQTGISG NQHLGPTNPQ LRDRIAAEAR RLQAAGLSSI
PSDLLYSSAS GLDPHISSAA AQAQVARVAA ARQRSPEVIA ELVECYRDRR VFGLIGGTGI
NVLQLNRALD LPQPSTNQIC PKL