Gene Synpcc7942_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1669 
Symbol 
ID3775741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1739595 
End bp1741685 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content58% 
IMG OID637800107 
Productpotassium-transporting ATPase subunit B 
Protein accessionYP_400686 
Protein GI81300478 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2216] High-affinity K+ transport system, ATPase chain B 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGC TTTCCCGTCA TCATCGTGCG CCGGGTGGAC CGCGATCGCA GCGCCGACAC 
CTCGCTCAAC CCCAACGCCA AGGACTGTAT CGGCGCGCCT TTTTTGAAGC CTTTCGCAAA
CTCGATCCTC GCCAGGTCGT TCGCAATCCG GTGATGTTCG TCGTCTGGCT CGGCACGGTC
CTTACGTTTC TGCTCGTCCT CGATCCAGGC TTATTTGGCA GCAGCAACGA GCCGGGAGCA
CGTTCGTTCA ATGCTCTGAT TTGCCTAACC CTGTTTCTGA CGGTTTGGTT TGCCAACGCC
GCTGAAGCGA TCGCAGAAGG GCGCGGCAAA GCGCAGGCCG ATGCCCTGCG AGCTACACAG
ACCCAGACCC TAGCGCGGCG ACTGACGGCC GGCGGTACGG TCGAATCGGT CAACTCCCCG
GAGCTTCGCA AGGGCGATCG CGTTGTCGTG GCAGCAGGAG AGATGATCCC TGCCGATGGC
GAAGTGATTG CGGGGGTCGC CTCCGTCGAT GAATCGGCGA TTACCGGCGA ATCGGCTCCT
GTCCTCAAGG AAGCAGGCTC AGATGTAGCC AGTTCCGTCA CTGGGGGGAC GCGGGTGATC
TCGGATCAAT TGACGATTCA AATCACCTCC GAACCGGGCA AAGGCTTCAT CGATCGCATG
ATCCAGCTGG TCGAAGGGGC CAAACGCAGC AAAACCCCGA ACGAAATTGC CCTGACGGTG
CTGTTGGCGG TTTTGACGCA AATCTTTCTG ATTGCGATCG CGACGCTGTC ACCGATCGCC
ACCTACCTCG GCAGTCCGAC CCCCGTCGCC ACGCTGATTG CTCTACTCGT CGCGTTGATT
CCGACCACGA TCGGCGGTCT CTTGAGTGCG ATCGGCATCG CTGGCATGGA TCGGGTGGCG
CAATTTAATG TGATTGCAAC TTCCGGTCGC GCCGTTGAAG CCTGCGGTGA TATCAATACC
CTCGTTCTCG ACAAGACCGG CACGATTACC CTTGGCAACC GTTTAGCGGA TTCCTTCATT
TCTCTTGCTG GGCGATCGCC TGCAGATGTC GCTAGAGCGG CTTGGATTGC CAGCTATTTT
GACAACACGC CGGAGGGCAA ATCGATTGTC CGCTTGGCAG AAAGTCAGCT GGGGCAATTG
GACTTTGACT GGCCATCGAC CACCGGCATC GATTTTTCAG CACGGACTCG GATGAGTGGC
ACCGATACTT CGGATGGGCA GGAGTTTCGC AAAGGGGCGG TCGATGCGAT TAAAGGCTTT
GCGCGATCGC GAGGCGGCAG CATTCCCGCC GATTTAGACG CCGCCTTTGA ACAGATCTCG
CGCTTGGGCG GCACTCCGCT CGCCGTCTGT ATCGACTCAG AAATCTACGG CGTCATCTAC
CTCAAAGACA TCATCAAGAC TGGCATTCGT GAGCGCTTCG ATCAGCTGCG GCGCATGGGC
ATTCGTACCG TCATGCTGAC CGGCGATAAC CATCTGACCG CCTCGGTGAT TGCGGCCGAA
GCCGGGGTCG ATGACTTCAT TGCCGAAGCC ACACCGGAAG ACAAAATCGC CGTGATTCAA
GCCGAGCAAA GCCAGGGCAA ACTGGTGGCC ATGACCGGGG ATGGCACCAA TGACGCCCCC
GCTTTGGCCC AAGCCAATGT TGGTCTCGCC ATGAATTCCG GCACCCAAGC CGCTAAGGAA
GCCGCCAACA TGGTCGATCT GGACTCAGAC CCAACCAAGT TGATCGATGT GGTGACGATC
GGCAAGCAAT TGTTGATTAC CCGCGGTGCC TTAACAACCT TTTCGATCGC CAACGATGTC
GCCAAGTACT TTGCGATTTT GCCGGCCCTG TTCATCAACG CCGGGTTAGC CCCCTTGAAT
GTGATGGGTC TAGCCACCCC ACGATCGGCG CTGCTGGCTG CGATGCTCTA CAACGCCTTG
ATCATTCCAG CCTTGATTCC GCTGGCGCTC AAAGGTGTTA AATTCCGGCC CCTCACTGCC
AACGAGCTGT TACAACGCAA TCTCTTGATC TACGGACTGG GCGGCTTGAT TGCACCATTT
CTGGCGATTA AAGCGATCGA TTCCGTGATT GTTCGTTCGG GGATTCTTTA G
 
Protein sequence
MSVLSRHHRA PGGPRSQRRH LAQPQRQGLY RRAFFEAFRK LDPRQVVRNP VMFVVWLGTV 
LTFLLVLDPG LFGSSNEPGA RSFNALICLT LFLTVWFANA AEAIAEGRGK AQADALRATQ
TQTLARRLTA GGTVESVNSP ELRKGDRVVV AAGEMIPADG EVIAGVASVD ESAITGESAP
VLKEAGSDVA SSVTGGTRVI SDQLTIQITS EPGKGFIDRM IQLVEGAKRS KTPNEIALTV
LLAVLTQIFL IAIATLSPIA TYLGSPTPVA TLIALLVALI PTTIGGLLSA IGIAGMDRVA
QFNVIATSGR AVEACGDINT LVLDKTGTIT LGNRLADSFI SLAGRSPADV ARAAWIASYF
DNTPEGKSIV RLAESQLGQL DFDWPSTTGI DFSARTRMSG TDTSDGQEFR KGAVDAIKGF
ARSRGGSIPA DLDAAFEQIS RLGGTPLAVC IDSEIYGVIY LKDIIKTGIR ERFDQLRRMG
IRTVMLTGDN HLTASVIAAE AGVDDFIAEA TPEDKIAVIQ AEQSQGKLVA MTGDGTNDAP
ALAQANVGLA MNSGTQAAKE AANMVDLDSD PTKLIDVVTI GKQLLITRGA LTTFSIANDV
AKYFAILPAL FINAGLAPLN VMGLATPRSA LLAAMLYNAL IIPALIPLAL KGVKFRPLTA
NELLQRNLLI YGLGGLIAPF LAIKAIDSVI VRSGIL