Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1652 |
Symbol | |
ID | 3775723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1721792 |
End bp | 1723432 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637800089 |
Product | Elongator protein 3/MiaB/NifB |
Protein accession | YP_400669 |
Protein GI | 81300461 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.606653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.975032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTCAA CTGCAAGCAG CGTCTTTGCT GACGAAACGC TGTTGTTTGA GCCGGCCACA CCGATCGCCA ATGCGGTGCC GCTGATTTTT GCCTTCCCGA ACGAGTACAG CGTCGGGATT ACCAGCCTTG GTTTCCAGAT TGTTTGGGCA ACGCTTGCAG CGCGATCGGA TCTGCAGGTC AGTCGCCTAT TTACAGATAT TGCAGAACCC CTGCCCCGTC AGCCGGAACT CCTGGGCTTT TCGCTGTCCT GGGAGCTGGA CTACGTCAAC ATTCTGGCGA TGCTGGAGCA GTTGGGCATC CCCCTGCGAT CGCGCGATCG TGGCGATGAG CATCCGCTCG TGTTTGGGGG CGGCCCAACG TTGACGGCAA ATCCGGAGCC CTTTGCTGAT TTCTTCGATG TGATCTTGGT CGGGGATGGT GAAGTGCTGC TCGACGCGTT TATCGACGCT TATCAACCCC TACGCGATCG CCCACGAGCA GAAAAGCTCC GACAACTGGC TCAAGTTCCA GGGCTCTATA TTCCGGCGCT TTACGAACCG ATTTATGAGG CGGCAGATGG GGCGATCGCC ACGATCCAAC CCATCGATAA CGACATTCCA GTCCAAATCG AGAAGCAGAC CTATCGCGGT AATGTTCTCT CCGCTTCAAC GGTAGTGACA CCTCGCGCTG CTTGGGAAAG CATCTACATG GTCGAGGTGG TGCGTAGCTG CCCTGAGATG TGTCGCTTTT GCCTCGCCAG CTATCTGACC CTGCCATTCC GTACCGCCAG CCTTGAGGAA TCACTGCAAC CTGCGATCGC TCGCGGATTG ACGGCAACGC AGCGGATTGG TCTATTGGGT GCTTCGGTCA CGCAGCATCC TGAATTTCCG GCCTTACTGG ACTGGTTAGG ACAGCCAGAA TTTACCGATG TTCGCCTCAG TGTGGCTTCA GTACGAACCA ATACGGTCAC TGAAAAATTT GCCAGTATTT TGGCGCAGCG CGGCACGAAG TCACTGACGA TCGCGGTGGA AAGTGGCTCA GAACGACTCC GCCAAGTGAT CAACAAAAAG CTGGCTCAGG CTGAGATTAC AGAAGCGGCA GTCAATGCCA AAGCCGGTGG ACTACAAGGG CTAAAACTCT ACGGTATGGC GGGAGTCCCG ACCGAAACGG AAGATGATTT GCTGGCAACC GCAGAGATGC TGAAAGGGCT GAAGAAAGCG GCACCGGGGC TACGGCTCAG CTATGGTTGC AGCACCTTTG TTCCCAAAGC CCAGACGCCA TTCCAATGGC AGGGCGTATC GCCAAAAGCG GAGAAGCGGT TGCAATTTTT GCAGAAGCAG TTACGGCCAC AGGGCATCGA ATTTCGGCCT GAAAGTTATA GCTGGTCCGT GATTCAAGCG CTGATCTCCA GAGGCGATCG CCGCCTCAGT TCTCTTTTAG AACGAGTGCG TCACTACGGT GAATCGCTGG GTAGCTACCG TCGCGCTTTC AAGGAGCTGA AAGGAACACT ACCACCGCTG GATTTTTACG TTTTCCAAGA CTGGGAGCCT GAAGCACCAT TACCTTGGCA ACATCTGCGC GGCCCACTGC CAGTCGAAAC CCTGCGCAAA CACCGTCAAC AGGCTTTCGC GATCGCGGCA GCCGGAGTAG GATCCAAGTA A
|
Protein sequence | MSSTASSVFA DETLLFEPAT PIANAVPLIF AFPNEYSVGI TSLGFQIVWA TLAARSDLQV SRLFTDIAEP LPRQPELLGF SLSWELDYVN ILAMLEQLGI PLRSRDRGDE HPLVFGGGPT LTANPEPFAD FFDVILVGDG EVLLDAFIDA YQPLRDRPRA EKLRQLAQVP GLYIPALYEP IYEAADGAIA TIQPIDNDIP VQIEKQTYRG NVLSASTVVT PRAAWESIYM VEVVRSCPEM CRFCLASYLT LPFRTASLEE SLQPAIARGL TATQRIGLLG ASVTQHPEFP ALLDWLGQPE FTDVRLSVAS VRTNTVTEKF ASILAQRGTK SLTIAVESGS ERLRQVINKK LAQAEITEAA VNAKAGGLQG LKLYGMAGVP TETEDDLLAT AEMLKGLKKA APGLRLSYGC STFVPKAQTP FQWQGVSPKA EKRLQFLQKQ LRPQGIEFRP ESYSWSVIQA LISRGDRRLS SLLERVRHYG ESLGSYRRAF KELKGTLPPL DFYVFQDWEP EAPLPWQHLR GPLPVETLRK HRQQAFAIAA AGVGSK
|
| |