Gene Synpcc7942_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1641 
Symbol 
ID3775711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1708665 
End bp1709165 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content58% 
IMG OID637800078 
Producthypothetical protein 
Protein accessionYP_400658 
Protein GI81300450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.664673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATAT CGGGTTGGTT ACTACCGATC GCTTTGCTAG GCTTGCCAGC TCCAAGCTGG 
GCGCAGTCCA ACACAGCGTG GCTAGACCAA CCACCCCCCA GTCGTGTTCT TCAACCACTA
GAAGCCGCAC CACCGATCGC AACACCTGTG ATCTCCAGCG ATCGTTTGGC GGTCCCCAAT
GCCCCCATTC CCACCAGCCG TCCCGAGGAT CCAGGCGTTC CACGGCTCTT ACTGAGCGAT
CGCTCCTTTG ATCCAAGCAG TGGCAATCCA CCGCCACCAC CTCAAGCCCT TGCAGAACCC
TCCGGGCCGC GCTATCGCCT CCTTGTCCAA GTCCACAACA GTGCAGAACA ACAAAGCCTG
ATCAGCTTAG TACCCGATGC CTTTGCCGAT AGTCGGGGTC GAATGCAAGC TGGTATTTTT
CGCGATCGTC AGCGGGCCGA TCAGCTTCTA CAATCGCTCA GCAGCCTAGG CTTAGCGGCC
AGCCTTGAGG TTCTTCCCTA A
 
Protein sequence
MRISGWLLPI ALLGLPAPSW AQSNTAWLDQ PPPSRVLQPL EAAPPIATPV ISSDRLAVPN 
APIPTSRPED PGVPRLLLSD RSFDPSSGNP PPPPQALAEP SGPRYRLLVQ VHNSAEQQSL
ISLVPDAFAD SRGRMQAGIF RDRQRADQLL QSLSSLGLAA SLEVLP