Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1640 |
Symbol | |
ID | 3775710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1707881 |
End bp | 1708414 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637800077 |
Product | hypothetical protein |
Protein accession | YP_400657 |
Protein GI | 81300449 |
COG category | [R] General function prediction only |
COG ID | [COG3688] Predicted RNA-binding protein containing a PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.676471 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTC TGCTGCTTGT CGATGGCTAC AACGTCATTG GTGCTTGGCA ACACTTACAG CAACTGCGCG ATCGCCATGG CTTGGAAGCA GCTCGCACAG AACTGGTTGA GTTGCTGAGT AATTACAGTG CCTACCAAGG CTATCTGACC AATGTTGTTT TTGATGCTCA ATATCGAGCA ACCCCAGGTC AACAGGAGCA AGTGACTGAG CAGCTCGTCG TCAGCTACAC AGACTCAGAG CAGACGGCTG ATACTTATAT AGAAATGACC TGTGCGAGTC ACCGTGACGC CTTGCGGACT GCCCGTCAGC GGGTCATTGT TGCCACCAGC GATCGCGCCC AGCAACTGAC AGTGATTGGC TTTGGTGCCG AGTGGATGTC GACCCATCGA CTGGCTCTCG ATGTCGAAGC TTCAATTCAA AAAGTTCGCC AGTGGCAAGC CCAGCAACGG CGCAAACACC AACCTAAAAC CCTCGGAAGC CGCTTGGATG ATCGGGTGCG GCGGCAACTG GAACATTGGC GGCGCCAGTC TTAA
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Protein sequence | MSALLLVDGY NVIGAWQHLQ QLRDRHGLEA ARTELVELLS NYSAYQGYLT NVVFDAQYRA TPGQQEQVTE QLVVSYTDSE QTADTYIEMT CASHRDALRT ARQRVIVATS DRAQQLTVIG FGAEWMSTHR LALDVEASIQ KVRQWQAQQR RKHQPKTLGS RLDDRVRRQL EHWRRQS
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