Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1637 |
Symbol | |
ID | 3775707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1705426 |
End bp | 1706484 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800074 |
Product | photosystem II D2 protein (photosystem q(a) protein) |
Protein accession | YP_400654 |
Protein GI | 81300446 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01152] Photosystem II, DII subunit (also called Q(A)) |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.719245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.411385 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATTG CAGTAGGGCG AGCGCCAGCG GAGCGGGGAT GGTTTGACGT CCTCGACGAC TGGCTGAAGC GCGACCGATT TGTATTTGTG GGTTGGTCAG GGTTGCTGCT GTTTCCCTGT GCGTATTTAG CACTGGGCGG GTGGTTGACC GGGACCAGCT TTGTGACGTC GTGGTACACC CACGGCATCG CGTCTTCGTA CTTAGAAGGC GGCAACTTTT TGACCGTAGC AGTGAGCACC CCAGCGGATG CGTTTGGGCA TTCGTTGATG CTGCTGTGGG GCCCCGAGGC ACAAGGGAAC TTCGTGCGTT GGTGCCAGTT GGGTGGCTTG TGGAACTTCG TAGCACTGCA CGGCGCCTTC GGCCTGATTG GGTTCATGCT GCGTCAATTT GAGATTGCGC GGTTGGTGGG CGTCCGTCCG TACAACGCGA TCGCCTTTTC GGGTCCGATC GCAGTGTTCG TGTCGGTGTT CTTGATGTAC CCGTTGGGTC AATCGAGCTG GTTCTTCGCT CCGAGCTTTG GCGTGGCAGC GATTTTCCGG TTTTTGTTGT TCCTGCAAGG GTTCCACAAC TGGACCTTGA ACCCATTCCA CATGATGGGC GTGGCCGGGA TTTTGGGTGG GGCATTGCTG TGCGCCATTC ACGGTGCGAC GGTGGAGAAC ACCCTGTTCG AGGATTCAGA GCAATCGAAC ACCTTCCGGG CATTTGAGCC GACGCAGGCC GAAGAGACGT ACTCGATGGT GACGGCGAAC CGTTTTTGGA GCCAGATTTT CGGGATTGCG TTTTCGAACA AGCGGTGGCT GCACTTTTTC ATGCTGTTCG TGCCGGTGAC GGGCTTGTGG ATGAGCTCGA TCGGGATTGT AGGTTTGGCG TTGAACCTGC GGGCGTACGA CTTCGTGTCG CAGGAGCTGC GGGCCGCTGA GGATCCGGAA TTTGAGACGT TCTACACGAA GAACATCTTG TTGAACGAAG GGATTCGGGC CTGGATGGCA CCGCAAGACC AACCGCACGA AAAATTCGTC TTCCCCGAAG AGGTTCTGCC TCGCGGTAAC GCTCTCTAG
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Protein sequence | MTIAVGRAPA ERGWFDVLDD WLKRDRFVFV GWSGLLLFPC AYLALGGWLT GTSFVTSWYT HGIASSYLEG GNFLTVAVST PADAFGHSLM LLWGPEAQGN FVRWCQLGGL WNFVALHGAF GLIGFMLRQF EIARLVGVRP YNAIAFSGPI AVFVSVFLMY PLGQSSWFFA PSFGVAAIFR FLLFLQGFHN WTLNPFHMMG VAGILGGALL CAIHGATVEN TLFEDSEQSN TFRAFEPTQA EETYSMVTAN RFWSQIFGIA FSNKRWLHFF MLFVPVTGLW MSSIGIVGLA LNLRAYDFVS QELRAAEDPE FETFYTKNIL LNEGIRAWMA PQDQPHEKFV FPEEVLPRGN AL
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