| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1622 |
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| Symbol | |
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| ID | 3775691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1689721 |
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| End bp | 1692192 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800058 |
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| Product | proteinase |
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| Protein accession | YP_400639 |
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| Protein GI | 81300431 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0350786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTTG CTTCACTGTC CTGCCCAGAA TTGTTGGCAC CTGCGGGCGA CTGGGACTGT
CTGCGAGCTG CGATTGAAAA TGGGGCGGAT GCCGTCTACT TCGGCCTCGA TCGCTTTAAT
GCACGGATGC GAGCCCACAA CTTTACCGAG GCGGATCTAC CAAAAGTGGT GGCGACGCTT
CACCAACGGG GGCTCAAAGC TTATGTCACC CTCAATACCC TGATCTTCCC GCAGGAACTC
CCTGCTGCTG AGCAATACCT GCGATCGATC ATCAGTGCCG GCGTCGATGC CGCGATCGTG
CAGGACGTGG GGTTGTGTCG GCTGATTCGG CACCTCTCGC CGACCTTCCC GATCCACGCC
TCCACTCAAA TGACGATCAG TAGCGCAGCA GGTGTGGCTT TTGCCCACGA TCTGGGCTGT
CAACTTGTGG TGTTAGCGCG GGAAAATTCT CTTGCCGAAA TCCAAAAAAT TCGCCAACAA
ACGACGGTTC TGAACAAAGC GTTGCCGCTG GAGGTCTTTG TCCACGGCGC ATTGTGCGTG
GCTTACAGCG GCGCTTGCCT CACCTCCGAA GCCTTGGGTG GGCGATCGGC CAATCGCGGC
GAATGTGCCC AAGCTTGCCG CATGAGCTAC GACCTGATTG CTGATGGTCA GACGATTGAC
CTAGGCGATC GCCAGTACTT GCTCAGTCCC CAAGATTTGA TGGGCATTGA ACTGTTGCCG
GAACTGATCG CAGCTGGCGT CTGCAGTCTC AAAATCGAAG GTCGGCTCAA GGCACCCGAG
TATGTGGCTA GTGTGACCCG CCGCTATCGC GAGGCGATTG ATCGCGCTTG GTTGGGACAA
AGCACAGAAC TACCTCCCAG CGATCGCTAT GAACTAGAGA TGGCCTTTTC GCGGGGCCTC
TCCTCTGGCT GGTTGCAGGG CATTGATAAT CAAGCGTTAG TTCAAGGTCG CTACGCCAAA
AAGCGAGGTG TTGATCTAGG GAGCGTCTTG GCAGTCGATC GCCGGGGCAT TCAGGTCGAG
CCGCTAGTGC CGATTCAGGC TGGAGATGGC TTGCTAATTG AAACCGAGCG GGGCGATCGC
GGCGGCCGTG TCTATCAGGT GGAACCGATC GCAGGTCAAC GTCTGCGCCT TTGTTTCAGC
CGCGATTTTG ATCTGCGAGC CGTGCAAGTG GGCGATCGCC TCTGGAAAAC CAGTGATCCT
GCTCTCGAAA AAGAACTGCG CCAAAGTTTT AGTGCGGAGC AACCCCGCTG GAAGCAGCCG
GTGGATCTAA CAGTGCAGGG TGCGATCGAT CAGCCCTTAG TTGTGATTGC TGGCGATCGC
CAAGGTCGTC AAGTCTCGGT GCAATCCGAA CAAGTTTTGC AGGCCGCGAC TCAGCATCCC
CTCGATCGCG ATCGCCTCGC GGCCCAGTTG GGACGGTTGG GAAACACTGC CTTTGAGTTA
GGGTCCCTCG AAAATCAGCT GCCGGATGGC TTGATTCTGC CGATTAGTGA ACTGAATCGC
CTACGTCGGC AGTGGGTGAG TGCGTTGGAA GCGCTGCGAT CGCAGCCGAA TCATTGGCCG
CTGAGTGCCA CAGCGAAGCT GGCTGACCTC TTGCCCAAGC GATCGGCAAC CCAACCGCGA
ACGCCGGAAC TCACGGTGCT GGTTCGAGAC TTGCCGCAAC TGGAAGCCGC GATCGCTACT
CAGGCGGTGC GACTCTATTG TGAATTTGAA GACCCCCGCC GCTACCGCGA AGCGGTCCAA
GTCTTCCGGC AAGCCCAGCG ATTAGAACAA ACGATTTGGC TAGCGCCACC GCGCATTTAC
AAGCCAGGCG AAACTTGGAT TTTGGAGCAG GTGCGACGGG CAGAGCCAGA TGGTTTTCTG
GTGCGCAACT ACGATCATCT GGCTGCTTTT CAGGGCGATC GCTGTGTGGG CGATTTCTCC
TTGAATGTCG CTAATCCTCT AACCGCGGCC CATTGGGTGG AGCAGGCCGG ACTAGAGTGG
CTGACGGCTT CCTACGACCT CAATGCTCAA CAACTGTTGG ATTTATTGGC GCAGACGCCG
ACCAATTGGC TGGAAGTGAC GATTCATCAG CATATGCCGC TGTTCCACAT GGAACACTGT
GTGTTTTGCG CATTCCTCAG TGATGGTCAT GACTTTCGCG ATTGTGGTCG CCCCTGTGAG
CAGCAAGAAG TGCGGCTACG CGATCGCGTT GGCGTAGAGC ACATCCTCAA GGCCGATGCC
GGCTGCCGCA ACACGCTTTA TAACGGCACG GCGCAAACTG GTGCCGAATT TGTTCCTGCT
TTGCAGAGCC AAGGGCTTTT CCGTTTTCGC ATCGATTGCT TACAGGAGTC ACCTGCTCAG
GTCACACAAC TCTGCGATCG CTATTGGCAG CTCTTGCGAG GGCAATGCAG CGGCGAACAA
CTCTGGCGTG AGTTGAAGTT GATGCGTCAA CTCGGTGTGA CTCGCGGCAC CCTCACGACC
GTGATCCGTT AG
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| Protein sequence | MAVASLSCPE LLAPAGDWDC LRAAIENGAD AVYFGLDRFN ARMRAHNFTE ADLPKVVATL
HQRGLKAYVT LNTLIFPQEL PAAEQYLRSI ISAGVDAAIV QDVGLCRLIR HLSPTFPIHA
STQMTISSAA GVAFAHDLGC QLVVLARENS LAEIQKIRQQ TTVLNKALPL EVFVHGALCV
AYSGACLTSE ALGGRSANRG ECAQACRMSY DLIADGQTID LGDRQYLLSP QDLMGIELLP
ELIAAGVCSL KIEGRLKAPE YVASVTRRYR EAIDRAWLGQ STELPPSDRY ELEMAFSRGL
SSGWLQGIDN QALVQGRYAK KRGVDLGSVL AVDRRGIQVE PLVPIQAGDG LLIETERGDR
GGRVYQVEPI AGQRLRLCFS RDFDLRAVQV GDRLWKTSDP ALEKELRQSF SAEQPRWKQP
VDLTVQGAID QPLVVIAGDR QGRQVSVQSE QVLQAATQHP LDRDRLAAQL GRLGNTAFEL
GSLENQLPDG LILPISELNR LRRQWVSALE ALRSQPNHWP LSATAKLADL LPKRSATQPR
TPELTVLVRD LPQLEAAIAT QAVRLYCEFE DPRRYREAVQ VFRQAQRLEQ TIWLAPPRIY
KPGETWILEQ VRRAEPDGFL VRNYDHLAAF QGDRCVGDFS LNVANPLTAA HWVEQAGLEW
LTASYDLNAQ QLLDLLAQTP TNWLEVTIHQ HMPLFHMEHC VFCAFLSDGH DFRDCGRPCE
QQEVRLRDRV GVEHILKADA GCRNTLYNGT AQTGAEFVPA LQSQGLFRFR IDCLQESPAQ
VTQLCDRYWQ LLRGQCSGEQ LWRELKLMRQ LGVTRGTLTT VIR
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