Gene Synpcc7942_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1601 
Symbol 
ID3775667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1667058 
End bp1667231 
Gene Length174 bp 
Protein Length57 aa 
Translation table11 
GC content57% 
IMG OID637800034 
Producthypothetical protein 
Protein accessionYP_400618 
Protein GI81300410 
COG category[S] Function unknown 
COG ID[COG4338] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.225631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.416178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGC GCTACACCAA GTCGAATCTG CCGCAAAAGA ATTGTCTGGT TTGCGGGCGT 
CCGTTTGAAT GGCGACGCAA GTGGAAGGAT TGCTGGGAAG AGGTGCGCTA CTGCTCCGAT
CGCTGTCGCC GTCGTCGGTC TTCTGCTAGT CAAACCGGTG AGGATCCTGC CTAG
 
Protein sequence
MAQRYTKSNL PQKNCLVCGR PFEWRRKWKD CWEEVRYCSD RCRRRRSSAS QTGEDPA