| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1518 |
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| Symbol | |
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| ID | 3774942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1568627 |
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| End bp | 1570927 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637799951 |
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| Product | ATP-dependent helicase PcrA |
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| Protein accession | YP_400535 |
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| Protein GI | 81300327 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.291194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTACGGC CCACTGCACA ACAACAGGCT GTGATTGATC ACGAGCAGGG ACGCGCTGTT
GTCGTGGCAG TGGCTGGTGC TGGCAAAACC ACCACGATTG CGCGGCGGAT TGGCCGCTTG
GTGCATCAAG TGGAAGTACC GCCTGGGCGG ATTCTGGCGA CAACTTTTAA CCGCTATGCC
AGGGGGCAAA TCCGCGAAAA GCTCAACCAG CTAGCGGTGC CTGTCGGTGT GGCGGTGCGG
ACTCTCCACG CGCTGGCGCA ACAAATCCTC AAGTTGGAAG CCGATCCTTG GCCTTTGGCC
GCCGATGGGG AGATGCGACG GCTGTTCTAC GACATGCAGT CGGCGATTCG CCAGGGACGG
CTCGATCTGT CGCTGGATCT GAGCAGTCAT GAGCAACGGC AAATTGCAGA CCTGAATGAG
GAGAGCTTCC TCAACTATCT AGGCTATCTC AAGGGCGATC TGCGCTTCAG TGCTTGGCAA
TTTGAACAGC TACCAACCCA TCTGCAAACG GTTGCCACGC TGGAAGTGTG GCCCGAGTCG
CAACGCTGGC TCAACGTTTG TGTTGACGCC TTTGAGCAAT GCCGCCAAGA GGCACGGTTG
CGTAGTTTTG ATGATCTGTT AGTCGATGCC TGCCGTTTGC TCTGTGCAGA TATGGGGATT
CGGGAGCGAG TGCGATCGCG CTTTGATTTC CTGATCGTTG ATGAATATCA AGACATCAAT
CGCGCCCAGA ACCTGATTAT TTCGGTTCTG GATGAAGCCC AGCAAAACTT GATGGTGGTT
GGGGATGATG ACCAGACAAT CTACGAATGG CGCGGTGCCC GTCCCCAGTT GATTTTGGAT
AAATTGCGCG ATCGCCAGTG GGTGCAGTAC ACCCTCGATC GCAACTTTCG ATCGCGCGCG
CCCCAGCTCC TGCTGGCCAA TGCCCTGATT CGCCACAATC GCCTGCGATC GCCCAAGCAA
TTGCAGGGAA CAAAGGCTTG GCAACATCAT TGCGAGTGGC GATCGTTTCC CTCAGGTTCC
GATCAAGCAG CGGCGATTGC CGAGCAAATT CTCGAATACC GCGATCGCGG CAAGCCCTTG
GCAGAAATGG TGATTTTGAT TCGCACCTAT GCCCAAACAC CGCTGATAGA ACAACAACTG
ATTGCAGCGC AACTGCCCTA CGTCATCCCT GGCAGTCAGC CTTTTTATCT GCGGCGAGAA
GTCAAACTGC TGCTAGCTTA CTTGGAGTTT GCCGAAGCAG AGCGCAACCG TGTTCAGAAT
GGTCTGACGC CAGCAACCCG CGATCGCTAC GACCAGTTAT TCCGCGAAAC ATCAAGTCGT
CCGAGCCGCT ACCTGAAACG ACCGGAGCTG CTCTCGATGC TCCAAGAAGC CTTGGACAAT
CCCCATTTGC CCTTGGCCAC GATCATCAGT CAACGCTGTC GCGATCGCTT GGGCCGCAAC
CGATCGCTGC AACGCTGGTT GGATTACCTC GGCTGGGTCT TGGGGGCTCA ACCCAGTTCT
GCTGCTGCCG CGATCGCCAA AATTGAGCAG CTCATCGACC TGCGGCGCTG GATCATCGAC
AGCGATATCT CGCCGGAGAG CGGGGCCCAG AAAGCCTTGA TTATCGACGC CTTACAAGCC
TTCGCGGGCG ATCGTGCGGT TCAGAGTTGG CTGCAGGAAA TGGCAGCATT GCAAGAGCAG
CCTCCCTTGT CCGACGAAGC CAGCGGCGTC AATCTGCTGA CAGTGTTCAA AGCCAAGGGG
CTGGAGTGGG ACACCGTTTT CATCCCCGAC TTAGATGCCG GTATTTATCC TTTTGGCTCT
AGTCGCGAGA GTGAATCTGG CCCCGGGCGC AACAGCTTCG ACCCGCTTTC AGAAGTCGCC
CTCGATCGCA GCTTGCAGGA AGAAGAGCGC CGCATTTTGT ACGTGGCTTT AACGCGCTCG
ATCAACAATC TGCACCTGTC TTCTGCCACT AATCAGCGAT CGCCTTTTTT GCAAGAAGCG
CAAATCAGCA AGATCCAAAC GCGCCTGCCA CGATTGCGAG CCCTTGCGAC TGGTCAACTC
CAACAACTCA ATGATCGCCA GCGCAATCAA CTAATTCATA TCGATCTCGC GTTCTGTGCC
CAGCAACGTC TGCATGAAGT GTTGGTCACT AGCCTGCGCA AGCTGCCTCC CCCAGCGATC
GCCCAGCACT GTCACACGGT TCAACAGTGG ATTCAGGACG CCATCGAGAG CGATCGCCCA
CCGCTGAAGT CTGATTTAAT CCAGCAGTTT TGGGCTGAGA TCACGGCTGA ACTCAGTGCA
GAGTTGATTA GTTCGCATTG A
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| Protein sequence | MLRPTAQQQA VIDHEQGRAV VVAVAGAGKT TTIARRIGRL VHQVEVPPGR ILATTFNRYA
RGQIREKLNQ LAVPVGVAVR TLHALAQQIL KLEADPWPLA ADGEMRRLFY DMQSAIRQGR
LDLSLDLSSH EQRQIADLNE ESFLNYLGYL KGDLRFSAWQ FEQLPTHLQT VATLEVWPES
QRWLNVCVDA FEQCRQEARL RSFDDLLVDA CRLLCADMGI RERVRSRFDF LIVDEYQDIN
RAQNLIISVL DEAQQNLMVV GDDDQTIYEW RGARPQLILD KLRDRQWVQY TLDRNFRSRA
PQLLLANALI RHNRLRSPKQ LQGTKAWQHH CEWRSFPSGS DQAAAIAEQI LEYRDRGKPL
AEMVILIRTY AQTPLIEQQL IAAQLPYVIP GSQPFYLRRE VKLLLAYLEF AEAERNRVQN
GLTPATRDRY DQLFRETSSR PSRYLKRPEL LSMLQEALDN PHLPLATIIS QRCRDRLGRN
RSLQRWLDYL GWVLGAQPSS AAAAIAKIEQ LIDLRRWIID SDISPESGAQ KALIIDALQA
FAGDRAVQSW LQEMAALQEQ PPLSDEASGV NLLTVFKAKG LEWDTVFIPD LDAGIYPFGS
SRESESGPGR NSFDPLSEVA LDRSLQEEER RILYVALTRS INNLHLSSAT NQRSPFLQEA
QISKIQTRLP RLRALATGQL QQLNDRQRNQ LIHIDLAFCA QQRLHEVLVT SLRKLPPPAI
AQHCHTVQQW IQDAIESDRP PLKSDLIQQF WAEITAELSA ELISSH
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