| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1464 |
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| Symbol | |
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| ID | 3773636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1517237 |
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| End bp | 1518832 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637799896 |
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| Product | porin |
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| Protein accession | YP_400481 |
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| Protein GI | 81300273 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000540569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0535262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC TTTTCTCGGC GCTGCTTCTA GCCCCGGCAA TTGCTGGTGT GGCTGCGGGC
GCAGCAAATG CTAACGGTTT AAGCACCGAA CAGCTCCAAA AAATTGACGC TGTAACTCCC
AACGGCATCA CCTCCGGTCA GATCACTTCG ATCACCGAAT TGAGTGATGT CAAGCCGACT
GACTGGGCTT ATCAAGCATT GCAGTCGCTA GTTGAGCGTT ATGGCTGCAT CGTCGGCTAC
CCTGATCGGA CTTACCGTGG TAGCCGCCCC CTCTCTCGTT ATGAGTTTGC AGCAGGCTTG
AACGCTTGCT TGGACAAAGT CATTGAATTT GCAGCGTCGA AAGAGGATCT CGACACCCTC
AAGCGACTGA CTGAAGAATT CCAAGCTGAG CTGGCGACCC TGCGTGGTCG TGTTGATAGT
CTCGAGGCTC GTGTTAAAGA GCTCGAAGCT ACCCGTTTCT CCACCACGAC TAAGCTACAA
GGTGAAGTAA TCTTCAGCTT GGACGCTGTT GCTAATACTG CTGGCAACGA ACGTAACCAA
GACGGTGCTG TATCGTTCGG CAACCGCGTC AGCTTGAACC TCAACACGAG CTTCACTGGC
AAAGACTTGC TATTGACCCG TCTGCGCGCT CGTAACATTG AGACGATTCA GCAGCGCTTG
TCGCCTGGCT TTAATCCCTC GGGCTCGCGG CTCGACTACG ACGGTACCGG TTCGCCTGGT
GTCCCGAATT CGGCTAATAC CTTTTTCCTT GACAAATTGC TGTACCGCTT CCCCGTCGGT
GATGTCTCCT TCACTGTTGG TACCGCGGGC GTTCAACCTC AAGACTACGG CCTGAGCGAC
GCTACCTTCT TCAGTGGCCC TGCGAACACG AAAGCCTTCA AGTATGTCGG TGCAGGTGTT
TACGCTGATA CTCGTGATGC TGATACCGCT GGTGTTGGCT TCAACTGGAA GGCTAGTAAG
AATTTCAGCT TCCAGGCTGG CTACATCAAC CGCAACTCTG CTGATGTCTC GACTGTCAAC
AGTGGTGGTG TCTTTGGCTT CACCCCGACA GGGACTGGTA CTAACTCTTG GGATGTGAAT
GCTCAAGTCA AGTACCAAAC TGATAACAAC AAGTTCCGAG TTGCTCTGGC CTACGCTCTG
CGAAATGGTC GCTACGCCAC TGACTTCGGT ACCACCAACG CCTTCCAGCC TTTTGGTGCT
ACCAACTACA ACAGCAACAA CCTTGCTCTC TCCTTGGGTT GGGCAATTTC TGATGCTGTG
ACCTTGTCAG CCGGCTACGG CATTGGCTTT GTCAATGAGC AAGGTACGAA CCAAAACGCG
ACTGTTCAGA ACTACGCAAT TGGCTTGACC TTCCCTAACC TGTTTGCTGA TGGCAACGAG
TTTGGTGTTG CAGCAGGCCA ACAACCTTGG GTCAGCAGCG CTTCTAACCG TTCGTCTGAA
GACACTGGTT CCTTTGGTGT TGAAACCTAC TACAAATTCC AAGTGACGGA CAATATCTCC
ATCACTCCTG GTATTTACGT GTTCAACAAC ACCAATGGCC AGCAAAACGG TGGAACGACT
TACGTTCCCT TCCTGAAAAC AGTCTTCCGT TTCTAG
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| Protein sequence | MKRLFSALLL APAIAGVAAG AANANGLSTE QLQKIDAVTP NGITSGQITS ITELSDVKPT
DWAYQALQSL VERYGCIVGY PDRTYRGSRP LSRYEFAAGL NACLDKVIEF AASKEDLDTL
KRLTEEFQAE LATLRGRVDS LEARVKELEA TRFSTTTKLQ GEVIFSLDAV ANTAGNERNQ
DGAVSFGNRV SLNLNTSFTG KDLLLTRLRA RNIETIQQRL SPGFNPSGSR LDYDGTGSPG
VPNSANTFFL DKLLYRFPVG DVSFTVGTAG VQPQDYGLSD ATFFSGPANT KAFKYVGAGV
YADTRDADTA GVGFNWKASK NFSFQAGYIN RNSADVSTVN SGGVFGFTPT GTGTNSWDVN
AQVKYQTDNN KFRVALAYAL RNGRYATDFG TTNAFQPFGA TNYNSNNLAL SLGWAISDAV
TLSAGYGIGF VNEQGTNQNA TVQNYAIGLT FPNLFADGNE FGVAAGQQPW VSSASNRSSE
DTGSFGVETY YKFQVTDNIS ITPGIYVFNN TNGQQNGGTT YVPFLKTVFR F
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