Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1459 |
Symbol | |
ID | 3773631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1511592 |
End bp | 1512212 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637799891 |
Product | hypothetical protein |
Protein accession | YP_400476 |
Protein GI | 81300268 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0233371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00798208 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCTGGGTC TGGCGATTCA TACTTCCACC CCCACCTTGG GGCTAGCGCT CAGTCAAGGA GCTGAGCTTC CGCTGGGGCA GACTTGGGAG GTTGGTCGCG ATACAGCAGC GGTCCTACTG CAGCACCTAC AAGACTTTAT TGCTCCGCAT CGTTGGACAG ATTTAGACTT TCTAGCTGTT GCCTATGGGC CGGGCGGCTT CACGGGAACG CGAATTGGCG TTGTCACAGC CCGCACCTTG GCTCAACAAT TAGAAATCCC TCTCTTTGGC CTCTCAACCT TGGCGGGGTT GGCTGCCGCC CAATGGCGAC AAACAGGGCA GAACCAAGCG ATTGCCGTGT CGATGGATGC CCAGCGGGGT CAGTTGATTG GCGCACTGTA TGGCTGTCAG GATGGCATTC CCGTTGCCCT AGAAGCAGAG CAGGTCTACG AACCAGTGGC CTGGACTGAG CGATTGGCCA GTTGGGGACA GGAAGATTGC CGAGCAGATG CCGCGATCGC AACCACGGTG ACGGATCTCC TCGCGATCGC AGAACGCCAG TGGCAACGGG GCGATCGCCC TGATTGGTCT TCTGCTTTGC CCTACTACGG CCAGCATCCA GTAACCATCA CGGCAGGCTA G
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Protein sequence | MLGLAIHTST PTLGLALSQG AELPLGQTWE VGRDTAAVLL QHLQDFIAPH RWTDLDFLAV AYGPGGFTGT RIGVVTARTL AQQLEIPLFG LSTLAGLAAA QWRQTGQNQA IAVSMDAQRG QLIGALYGCQ DGIPVALEAE QVYEPVAWTE RLASWGQEDC RADAAIATTV TDLLAIAERQ WQRGDRPDWS SALPYYGQHP VTITAG
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