Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1457 |
Symbol | |
ID | 3773629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1510305 |
End bp | 1510982 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637799889 |
Product | 1-acyl-sn-glycerol-3-phosphate acyltransferase |
Protein accession | YP_400474 |
Protein GI | 81300266 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.211879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0393142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGAAC AGCAGCAGAC CTCACGGTCT AATCTTCTGG CTCGCCGCGA TCGCGAACCC TTCAACTCGC TGCTGCTCTA CCACCTGTTC AAGTGGTCGG TGGTCAGCCC CATGCTGCAC CTCTACTTCC GGGGACGGAT TTACGGGGCG GGTAATGTCC CGCGATCGGG GCCGCTGATT GTGGTCAGTA ACCATGCCAG CGATTTCGAC CCGCCGATTG TCTCCAACTG TGTGCGGCGA CCCGTCGCTT TCATGGCAAA AGAGGAGCTG TTTCGCGTTC CTGTCTTAGC GCAGGCGATC CGTCTCTACG GTGCCTATCC AGTCCGGCGG GGCAGCAGCG ATCGCAAGGC CCTACAAGCG GCGATCGCGG CAGTGGAATC CGGCTGGGCA ACCGGTGTCT TTCTGGAAGG GACACGCACT CGCGATGCTC GCATTCACCA GCCCAAGCTG GGGGCAGCGC TGGTAGCGCT CAAAACGGGG GCACCGCTCT TGCCGGTCAG TCTCTGGGGA ACCGAGCGCA TTCTCCAACG AGGCTCCTTT TTACCGCGCC CCGTGCCGCT GACGATTCGC ATTGGCGAGC CGATCGCACC GCCCCAATCA GGCGATCGCG CGGAACTGGA GCGGGTTACC TTGAGCTGTG CCGCCGCGAT TAACCATTTA CACAGTCTGG GTCGCTAG
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Protein sequence | MLEQQQTSRS NLLARRDREP FNSLLLYHLF KWSVVSPMLH LYFRGRIYGA GNVPRSGPLI VVSNHASDFD PPIVSNCVRR PVAFMAKEEL FRVPVLAQAI RLYGAYPVRR GSSDRKALQA AIAAVESGWA TGVFLEGTRT RDARIHQPKL GAALVALKTG APLLPVSLWG TERILQRGSF LPRPVPLTIR IGEPIAPPQS GDRAELERVT LSCAAAINHL HSLGR
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