| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1453 |
|---|
| Symbol | |
|---|
| ID | 3773625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1506399 |
|---|
| End bp | 1507133 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637799885 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_400470 |
|---|
| Protein GI | 81300262 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.952418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0249242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAATC GCAAGGAAAA AATCCTCGTT GTCGACGATG AAGCGAGCAT CCGGCGGATT
CTTGAAACTC GGTTGGCGAT GATTGGTTAC GAAGTTGTCA CCGCAGCCGA CGGCGAAGAA
GCCCTCATCA CCTTCCGCAA TGCTACGCCG GATCTCGTGG TGCTCGATGT GATGATGCCC
AAGCTCGATG GCTATGGCGT TTGCCAAGAG CTGCGCAAAG AGTCGGACGT TCCGATCATC
ATGCTGACAG CCTTGGGCGA TGTGGCCGAT CGCATTACGG GGCTTGAGTT GGGAGCTGAT
GACTACGTCG TCAAACCCTT CTCGCCTAAG GAACTAGAAG CGCGAATCCG CTCGGTGCTG
CGTCGGGTCG AAAAAAGCGG TGCTAATGGC ATCCCCAGTT CGGGCGTCAT CCAGATCAAC
AGCATCCGCA TCGACACCAA TAAGCGCCAA GTCTACAAAG GCGATGAGCG CATCCGTCTG
ACGGGCATGG AGTTCAGTTT GTTGGAACTG CTGGTCAGCC GCTCCGGTGA ACCTTTTAGC
CGCGCCGAAA TCCTGCAAGA GGTCTGGGGC TATACCCCCG AGCGCCACGT CGATACCCGC
GTAGTCGATG TCCACATCTC GCGGCTGCGC GCCAAATTGG AAGACGATCC GGGCAACCCT
GAGCTCATTC TGACGGCCCG AGGAACCGGC TACCTCTTCC AACGCATCGT TGAACCGGGC
GAAGAAGGGC GTTAG
|
|---|
| Protein sequence | MENRKEKILV VDDEASIRRI LETRLAMIGY EVVTAADGEE ALITFRNATP DLVVLDVMMP
KLDGYGVCQE LRKESDVPII MLTALGDVAD RITGLELGAD DYVVKPFSPK ELEARIRSVL
RRVEKSGANG IPSSGVIQIN SIRIDTNKRQ VYKGDERIRL TGMEFSLLEL LVSRSGEPFS
RAEILQEVWG YTPERHVDTR VVDVHISRLR AKLEDDPGNP ELILTARGTG YLFQRIVEPG
EEGR
|
|---|
| |