Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1441 |
Symbol | cobD |
ID | 3773613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1495174 |
End bp | 1496151 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637799873 |
Product | cobalamin biosynthesis protein |
Protein accession | YP_400458 |
Protein GI | 81300250 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.282346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.506208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTCTG CGTCACTGAC GACGATCGCG GTCTTGGGGT TGGCGGCCTT GCTGGATTAC GGTGTCGGCG ATCCCTGGGG TTGGCCGCAT CCGGTGCAGG CTTTGGGCTG GGTCATTGCT TGCTGGCGCG ACTGGACGTT TCGCTGGCTG AAATCTGCGA TCGCTCAGCG GATCTCAGGC ATGGTCCTGA CGATTGTTCT GGTGGCTGGT AGCGCGATCG CTAGCTGGGT TGCTTTTGGG GCGATCGCTC GTCTCTCACC ACTCCTCTCG GCAGGTCTGC AAGTGATTCT GCTGGCAAGC TGTTTCGCCG GTCGCAGCTT GCGGGAAGCA GCTGCGGAAG TTCTGAAACC CCTAGCTGCT GAGGATTTGC CAGCAGCTCG AAGGGCACTG AGTCGCTACG TGGGCCGCGA TACTGATCAG CTGTCGGCGC TCGAAATTCA GCGAGCGGTG CTGGAAACGG TGACTGAAAA TTCGACGGAT GGTGTTTTGG CACCACTGTT CTATGCCGGA TTAGGAGTAT TGCTGGGACT TGGCCCTGTT CCGTTGGCGA TCGCCTATAA GGCTGCCAGC ACCTTGGATT CGATGGTGGG CTACCGCCGC CCGCCCTACA CGAACCTAGG TTGGTTTCCA GCTCGTAGCG AGGATGTCTG GACTTGGTTG CCCTGCCGCT TGGTGGTGCT GACGATCGCG CTATTCAGTG GTCAGCCCCG ACAGGTCTGG CAAATTTGCT GCCGCGATGC TCCGGCGGAT CCCAGTCCCA ATGCAGGCTG GAGCGAAGCG GCCTACGCAG CTGCGCTGGG GGTTCAAGTC GGCGGCGACA ACGTCTACCA AGGTCAAATC GTCTCGAAGC CGCTACTGGG GGATCCACAG CGATCGCTGG ATGCCACAGT CATTCAGCAA GCCTTGCAGT TAACCCGCAT CGCTTTTTTG CTTTGGTTAG CTGTGATCGC GGGACTGCTA CTAGCGTTGG GGCATTAG
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Protein sequence | MMSASLTTIA VLGLAALLDY GVGDPWGWPH PVQALGWVIA CWRDWTFRWL KSAIAQRISG MVLTIVLVAG SAIASWVAFG AIARLSPLLS AGLQVILLAS CFAGRSLREA AAEVLKPLAA EDLPAARRAL SRYVGRDTDQ LSALEIQRAV LETVTENSTD GVLAPLFYAG LGVLLGLGPV PLAIAYKAAS TLDSMVGYRR PPYTNLGWFP ARSEDVWTWL PCRLVVLTIA LFSGQPRQVW QICCRDAPAD PSPNAGWSEA AYAAALGVQV GGDNVYQGQI VSKPLLGDPQ RSLDATVIQQ ALQLTRIAFL LWLAVIAGLL LALGH
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