Gene Synpcc7942_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1414 
Symbol 
ID3774127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1465709 
End bp1466434 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content57% 
IMG OID637799846 
ProductATPase 
Protein accessionYP_400431 
Protein GI81300223 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAT CCGCGCCTCC CGTCATTCAG TTCGAGCATG TCAGCAAGAT CTACGGCGAA 
GGGGAAACTA CGGTCCGTGC CTTGGATCAT GTCGACTTTC AAGTTCGGGC GGGTGAGTAT
TGCGCGATTA TGGGCGCTTC GGGTTCGGGA AAGTCGACGG CAATGAACCT GATTGGTTGC
CTTGATCGCC CCACAGCTGG CCGCTATTAC CTCGACGGCA CCGATGTCGC CGATTTGGAT
GACGACGCCC TCGCTGCCGT GCGCAATCGC AAGATTGGAT TTGTTTTTCA GCAATTTCAC
CTGTTGCCCC AGCTCAGCGC GGTCGAGAAT GTGATGCTGC CGATGATCTA CGCCGGCATT
TCTCAGCAGG AGCGGCGCGA TCGCGCTGTC GCTGCTTTAA CCCAAGTGGG CCTCGCTCAA
CGACTGGACA ATAAACCCAA TCAGCTGTCT GGGGGACAAC AACAACGGGT GGCGATCGCC
CGAGCGATCG TGAATCAACC AGTGCTATTG CTGGCAGATG AACCGACTGG AGCATTGGAT
TCCCAGACGA CCGAAGAAGT GCTGAATATC TTCGACCAGT TGCACCAGCG GGGCATCACG
ATCGTGATCG TCACCCACGA AGCCGAGGTC GCCGATCGTG CCGAGCGGGT GATCTGGTTC
CGCGATGGCC AAATCCAGCG GGAAACCCAA AATCCGCCTC GGCCAGTCCT TGCAGCTACC
TTTTGA
 
Protein sequence
MAESAPPVIQ FEHVSKIYGE GETTVRALDH VDFQVRAGEY CAIMGASGSG KSTAMNLIGC 
LDRPTAGRYY LDGTDVADLD DDALAAVRNR KIGFVFQQFH LLPQLSAVEN VMLPMIYAGI
SQQERRDRAV AALTQVGLAQ RLDNKPNQLS GGQQQRVAIA RAIVNQPVLL LADEPTGALD
SQTTEEVLNI FDQLHQRGIT IVIVTHEAEV ADRAERVIWF RDGQIQRETQ NPPRPVLAAT
F