Gene Synpcc7942_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1413 
Symbol 
ID3774126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1464941 
End bp1465696 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content56% 
IMG OID637799845 
Producthypothetical protein 
Protein accessionYP_400430 
Protein GI81300222 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACGT TGTTTGTAAT TGGGATTGGA GCTGGCCTCT TGGCAGGACT GCTGGGAGTG 
GGCGGCGGCG TGTTGATGGT GCCGGTCTTG ATCGGTTTAG GCGTCAGCCC GGTGCAAGCC
TTTGGCACCA GTAATCTCGC CATTCTGATC ACCTCAATCT CTGGCACCTG GCAAAACTGG
CGATCGGGCA ATTTACAGGC AGCGAGTATC TGGCAACTGG GTCTACCGGC GATCGCGACA
GCCCAACTGG GGGTCTTTCT GGCCCAACGG CTACCGGGCA ATGTTCTGCT GCTGGGAATT
GCCGGCCTTT ACTTTCTTAA TATCTTTTTG GTTGAACTGC GGCAGTGGTT GAACCGTAAC
GCCTCGCCCG ACAAGGATAA GCCCACTCAG CCTAGCCTGA TGTCTGTACT GATTACGGGC
GCTTTAGGGG GCGTCCTAGC AGGACTGTTT GGGATTGGGG GGGGCACGCT GATGGTGCCG
CTGCAGGTGC TGTTGATGGG GGTACCGATC AAAACAGCAG TGCAAACCAG CCTCGGCGTG
ATTATCGTCA CTGCCTGCTC AGCGTTGAGT GGTTATGCAG TCGCTGGCGA CGTACTCTGG
GTCCAAGGGT TTTGGCTGGG TTTGGGCGGC TTACTGGGCG TGCAGGTGAC CACGCGGCTC
TTGCCCAAGT TACCTGCAGT GCTGGTTCAA CGCTGCTTTC AGCTGTTGCT ACTTAGTTTT
GGGATCTATT TCATCTGGAA GGCTCAAAAT CCCTAG
 
Protein sequence
MVTLFVIGIG AGLLAGLLGV GGGVLMVPVL IGLGVSPVQA FGTSNLAILI TSISGTWQNW 
RSGNLQAASI WQLGLPAIAT AQLGVFLAQR LPGNVLLLGI AGLYFLNIFL VELRQWLNRN
ASPDKDKPTQ PSLMSVLITG ALGGVLAGLF GIGGGTLMVP LQVLLMGVPI KTAVQTSLGV
IIVTACSALS GYAVAGDVLW VQGFWLGLGG LLGVQVTTRL LPKLPAVLVQ RCFQLLLLSF
GIYFIWKAQN P