Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1409 |
Symbol | |
ID | 3774122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1460847 |
End bp | 1461869 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799841 |
Product | iron transport system substrate-binding protein |
Protein accession | YP_400426 |
Protein GI | 81300218 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTTGTC TACGTATCTG GTCAACGGGC CTTGCTGCTC TGCTCCTCAG CACAGGCCTT GCAGCCTGCT CAGGGGGTAG CGATAAGGTC GTCAACATCT ACTCGTCCCG GCATTACAAC CAAGACGATG AACTCTACAA AGCTTTCACA GACAAGACCG GCATTCAGGT CAATGTGATT GAAGGCAAAG ATGCTGAGCT GATTGAGCGC ATCCAAAGTG AAGGAGCCAA CAGCCCTGCC GATGTCCTGA TTACGGTGGA TGCGGGTCGC CTGTGGCAGG CGGAGTCAAA GGGACTCTTC CAGCCCGTGC AATCATCCGT GCTCACCGCT GGCCTGCCTG ATGACCTGCG CGATCCGGAC GGCCGCTGGT TTGGATTTGC CCGTCGGGCC CGCGTCATCA TCTACAACAA AGCCAAGGTT CAGCCCAGTC AGCTTTCCAC CTATCAAGCC CTCGCCAACC CCGAGTGGCG TGGCAAGCTA TGCATGCGCA GCTCTGACAA CATCTACAAC CAGTCCTTAG TTGCGGCAAC GATCGCAACG CAAGGGGAAG CAGCTACGGA AGAGTGGATC AAAGGTTTGA CGGCAAACTT TGCGCGACCG CCCCAGGGCA ACGACACCGC TCAGATCAAG GCGGTTGCGG AAGGCGTCTG TGATGTCGCG GTCGTCAATC ACTACTACGT CGCACGGTTG TTGGAATCCA AAGAGGCGAG CGATCGCGAA ATTGCCTCAA AAGTCGGGGT CTTTTTCCCG CGCCCCACCC ACGTCAATGT CAGTGGTGCC GGCGTTGCGA CCAATGCTCC ACACAAGGAA AATGCAGTTG CATTTCTCGA GTTCTTGGCG AGCCCCGACG GACAGCGCTA CTTCACCCAA GGCACCTACG AGTATCCAGC CAAAGCCAAT ACGGCTGAGG ATGCAGTGGT CCAAAGCTTT GGCCCCTTTG AGGCCGCTCC CGTCAATGTC GATGTCTACG GGGCCAACAA TGCTGAAGCG GTGAAGATTA TGGACCGTGC AGGCTGGCGT TAA
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Protein sequence | MSCLRIWSTG LAALLLSTGL AACSGGSDKV VNIYSSRHYN QDDELYKAFT DKTGIQVNVI EGKDAELIER IQSEGANSPA DVLITVDAGR LWQAESKGLF QPVQSSVLTA GLPDDLRDPD GRWFGFARRA RVIIYNKAKV QPSQLSTYQA LANPEWRGKL CMRSSDNIYN QSLVAATIAT QGEAATEEWI KGLTANFARP PQGNDTAQIK AVAEGVCDVA VVNHYYVARL LESKEASDRE IASKVGVFFP RPTHVNVSGA GVATNAPHKE NAVAFLEFLA SPDGQRYFTQ GTYEYPAKAN TAEDAVVQSF GPFEAAPVNV DVYGANNAEA VKIMDRAGWR
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