Gene Synpcc7942_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1366 
Symbol 
ID3775560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand- 
Start bp1404292 
End bp1405203 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content56% 
IMG OID637799798 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_400383 
Protein GI81300175 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase
[TIGR02235] 1,4-dihydroxy-2-naphthoate phytyltransferase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACTG CTCCGCCCCG CCCCAACAAG CTTTGGCTCG CAGCCCTGAA ACCCCCCATG 
TACAGCGTGG CCATCATGCC TATCGTGCTG GGCAGCGCTG TCGCCTACTG GGAAACCAGC 
CAAATTAACT GGGCAACAGC AGTGCGTTTT GGCCTGGCAG CGGTGTTAAT CCTGCTCTGG 
GAGAACCTCT GCAACGACGT GTTCGATGCG TCCACCGGCA TCGATCGCCA GAAGCATCAC 
TCGCTCGTCA ACCTCACGGG TCACCGTTGG CTGCTGTTTT GGCTGGCCCA AGCCAGCTTG 
ATCCTAGGGT TGGCCCTGAT TGCCGCGATC GCCCAAACCC AAGGTTGGTT GATTCTGGGG 
ATCATCCTCG TCTGCTGCCT CCTGGGCTAC CTCTATCAAG GCCCGCCCTT TCGCCTTGGC 
TATCGAGGTC TGGGGGAATT TCTCTGTTTT CCGGCGTTTG GGCCCTTGGC AGTCTCTGCT 
GTTTACTTCA GCCAAACCGG GAGCTTTTCG AGCACGGCTT TGTGGGCTTC GATCAGCTTG 
GGAATCAGCA CCAGCTTAGT GCTCTTTTGC TCCCACTTTC ATCAAGTTGA TGACGACCTC 
GCCGCAGGTA AAAAATCACC GATTGTTCGA CTCGGCACAA GACGGGCAGC CCAGCTTTTG 
CCTTGGGCTT GTGGACTGAC ATTAGCCACG ATCGCAATCC CAATTCTGTT CCAAGTTTTT 
CCTTGGGCCA CCGCGATCGC CTTGATTAGC ATTTTCCCTG CGCGATCGCT CTGCCGCTTT 
GTGCGAACCT CGCATTCACA ACCAGCAGTG GTCAGCCGGT CGAAGTTCCT CGCAATCCAT 
TTTCAGTTTT GGAGTGGGTT GCTCTTTAGC TTGGGTTTTG TACTAGCCGA CCAACTCTCA 
TCGAGTCTTT AA
 
Protein sequence
MQTAPPRPNK LWLAALKPPM YSVAIMPIVL GSAVAYWETS QINWATAVRF GLAAVLILLW 
ENLCNDVFDA STGIDRQKHH SLVNLTGHRW LLFWLAQASL ILGLALIAAI AQTQGWLILG 
IILVCCLLGY LYQGPPFRLG YRGLGEFLCF PAFGPLAVSA VYFSQTGSFS STALWASISL 
GISTSLVLFC SHFHQVDDDL AAGKKSPIVR LGTRRAAQLL PWACGLTLAT IAIPILFQVF 
PWATAIALIS IFPARSLCRF VRTSHSQPAV VSRSKFLAIH FQFWSGLLFS LGFVLADQLS 
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