| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1351 |
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| Symbol | |
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| ID | 3775544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1382386 |
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| End bp | 1383096 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799782 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_400368 |
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| Protein GI | 81300160 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00941248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTTTTG ACAGACCCAT GCCCCAAGCC GTTATTTACG ATCTCGATGG TCTGCTGCTA
GACACGGAGC CGATCCACGC CCAGGTCTAC GACGAAGTTG CTCAGCAGTT TGGTGTTCAG
CTCGATCCCG CCTTTCAGGC CAAATTGCGC GGTCGTCCCT CCCGTGAGAC TTCACGCTTG
ATTGTGGAAA CCCTCAATCT CCCCGTGACG CCGGCGGAGT TTCTGGCGAT TCGCAAACCG
ATCATCGAAG CGCGAGTCGC CCAATCGCCA GCCCGTCCGG GTGCTGCGGA ATTGGTGCAG
GCGTTGCATC AGCGGCAGTT TCCCCAAGCG ATCGCCACCA GTTCGACCCA ACCGGCATTT
GCGATCAAAA CCCAGCAGCA CCAGCATTGG TTTCGGCTGA TCGAGACTGT TGTTTGCGGC
GATGACCCGC AACTGGAACG GCCCAAACCT GCGCCGGATA TTTTTTGGCT GGCGGCCAAG
CGCCTTGGGG TCAAACCCGA AGCCTGTTTG GTCTTCGAAG ATTCCGTCAG TGGCGTACGG
GCAGCCCTGG AGGCGGGGAT GACAGTTATC GCTGTGCCTG ATCCTGCCGA TCGCGATCGC
TTGCCCTCGG AAGTGCACTA CTGCTTAGAA AGTTTGGCCG ACCTCTTGGA CCGCGATCGC
TATCCTGACC TCTTAGCGGA CTTGACGGCC CTACCGGCTT TGCCTCGATA G
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| Protein sequence | MFFDRPMPQA VIYDLDGLLL DTEPIHAQVY DEVAQQFGVQ LDPAFQAKLR GRPSRETSRL
IVETLNLPVT PAEFLAIRKP IIEARVAQSP ARPGAAELVQ ALHQRQFPQA IATSSTQPAF
AIKTQQHQHW FRLIETVVCG DDPQLERPKP APDIFWLAAK RLGVKPEACL VFEDSVSGVR
AALEAGMTVI AVPDPADRDR LPSEVHYCLE SLADLLDRDR YPDLLADLTA LPALPR
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