Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1338 |
Symbol | |
ID | 3775531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1372863 |
End bp | 1373645 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799769 |
Product | hypothetical protein |
Protein accession | YP_400355 |
Protein GI | 81300147 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.193609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATCC CCTTCTTTCT GCCCCTAGCG GCGCTGGCCG GTACCCTTCT GACGAGTTTG ACCCCTCTTA CGCCGCAGGC ACGGGCGGCT CAGTTCGGGC AAGCTGAGGT CGATCAGAGT AAATTTGTCT TAGCTGCTTC ACCGATCGGC AACGGTAGTC GCCATCAGTT ACTGATCATT GAACAGGTCA AAAGCACCCG TCCTTGCTGG GTGGAAGAGG CAGGTACCCC AACACGTATC AATCCGCTGT TGTTGACCTT CGACTTCTCT GGCATTTGCG ATCGCAAGAT CGACAGCAAT GGCTACTCCC TGCGAATTGC TGGAGTAGAT CTCGGTTTAA ACTACCGCCT CAGCATTGTT CGCCGTAATG GCCAAATGGT GTTGGTTGGT CAAGCCTTTC GCAGTGGTCC TGAGCTGGTG ATTGCGACGG CCAATGGGGA ATCTGCCGGC TTTACTAAGC TGGAACTGCA ACCGGGCTGG CGCTTGGGTC GTCGGACTTT TGATGGCAAA GCCTTGGGTC ATATCTATTT AGTGACCGAT CAGATCCCGC CCGGCATGGC CCTACAAGGT GCTCAGACCA GTCCGAGTGC TGCGGTGGTT CCTCCAGCTA ACGTGACCAC ACCGGTTAAA CCAGCCCCTG CACCTGCTTC ATTGCAACAA CCAGTGCCTC CCCGGCCGCT CCCTAGTGCA AGTCAAGCCC CTGCCCCCAC GCTCCGGCCT CTGACTCCCC CGCGGCTAAC CCCGCTGCGT CCCTTGCGCC CGTTGACCCC AACCCAGCCG TAA
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Protein sequence | MRIPFFLPLA ALAGTLLTSL TPLTPQARAA QFGQAEVDQS KFVLAASPIG NGSRHQLLII EQVKSTRPCW VEEAGTPTRI NPLLLTFDFS GICDRKIDSN GYSLRIAGVD LGLNYRLSIV RRNGQMVLVG QAFRSGPELV IATANGESAG FTKLELQPGW RLGRRTFDGK ALGHIYLVTD QIPPGMALQG AQTSPSAAVV PPANVTTPVK PAPAPASLQQ PVPPRPLPSA SQAPAPTLRP LTPPRLTPLR PLRPLTPTQP
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