| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1266 |
|---|
| Symbol | |
|---|
| ID | 3773555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 1290360 |
|---|
| End bp | 1290953 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637799696 |
|---|
| Product | Ham1-like protein |
|---|
| Protein accession | YP_400283 |
|---|
| Protein GI | 81300075 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAT TAGTCGTCGC AACAGGGAAT CCGGGCAAAC TGCAGGAGCT GCAAGCTTAC
TTGGCTGAGA GTGGCTGGAC CTTGCAGCTG AAGCCAGCCG ATTTAGAAAT TGAGGAAACT
GGCCAGACCT TCGCGGAGAA TGCCGCCCTG AAAGCGCAAC AAACCGCGAT CGCGACGGGA
GAATGGGCGA TCGCTGATGA CTCGGGACTG AGTGTCGATG CGTTAAACGG TGCCCCCGGA
CTGTTTTCCG CTCGCTGGGG CCATAGCGAT CGCGATCGCA TCGATCGCTT GCTGCGCGAA
CTTACAGGAC ATGAGCAGCG AACCGCAGCG TTCATCTGTG CGATCGCTGT TGCCTCACCC
CAAGGCAACA TTGTTCTGGC GGTCGAGGGC CATTGTCCCG GCGAAATCCT GACAGCCCCG
CAGGGGGCGG GTGGCTTTGG CTACGACCCT ATCTTCTGGG TGCCCGAGCT GCAGCTCAGC
TTTGCTGAGT TAGCGCCTGA GCAAAAACGC CAGGTCAGTC ATCGCGGGCG AGCCCTTGCT
CAGCTTTTGC CCCAACTGCG ATCGCTGGCG ACCCAGCAGA CGGCGCAGCC CTAG
|
|---|
| Protein sequence | MKPLVVATGN PGKLQELQAY LAESGWTLQL KPADLEIEET GQTFAENAAL KAQQTAIATG
EWAIADDSGL SVDALNGAPG LFSARWGHSD RDRIDRLLRE LTGHEQRTAA FICAIAVASP
QGNIVLAVEG HCPGEILTAP QGAGGFGYDP IFWVPELQLS FAELAPEQKR QVSHRGRALA
QLLPQLRSLA TQQTAQP
|
|---|
| |