Gene Synpcc7942_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1249 
Symbol 
ID3773537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1273621 
End bp1273755 
Gene Length135 bp 
Protein Length44 aa 
Translation table11 
GC content46% 
IMG OID637799678 
Productphotosystem I reaction center subunit IX 
Protein accessionYP_400266 
Protein GI81300058 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000378709 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGCCA TGGATGGTCT CAAACGTTAT CTATCTTCTG CCCCAATTCT CGCAACGATT 
TGGTTTGCGA TTACTGCTGG CATCCTGATT GAATTCAATC GCTTCTTCCC TGATTTGCTC
TTCCATCCCC TCTAG
 
Protein sequence
MLAMDGLKRY LSSAPILATI WFAITAGILI EFNRFFPDLL FHPL