| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1239 |
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| Symbol | |
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| ID | 3773527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1261868 |
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| End bp | 1263199 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637799668 |
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| Product | ABC-type nitrate/nitrite transport system substrate-binding protein |
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| Protein accession | YP_400256 |
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| Protein GI | 81300048 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAT TTTCTCGGCG CAAATTCCTG TTGACGGCGG GCGGAACTGC AGCAGCAGCC
CTCTGGCTCA ATGCCTGCGG TAGCAACAAC AGCTCCACTG ATACGACTGG TTCGACTTCA
ACCCCGGCTC CCAGCGGTAC GAGTGGCGGC GATGCGCCAG AAGTCAAAGG TGTGACCTTG
GGCTTCATTG CCCTGACCGA TGCAGCGCCG GTGATCATCG CCCTCGAAAA AGGTTTGTTC
GCCAAGTACG GCCTACCCGA CACCAAGGTC GTCAAGCAAA CCTCTTGGGC TGTCACCCGC
GACAACCTTG AGTTGGGCAG CGATCGCGGC GGCATCGACG GTGCCCACAT CCTTAGCCCA
ATGCCCTACT TGCTGACGGC GGGCACGATC ACCAAGTCGC AGAAGCCGCT GCCGATGTAC
ATCTTGGCGC GACTCAATAC CCAAGGTCAG GGCATTTCGC TTTCCAACGA GTTTCTGGCT
GAAAAGGTTC AGATTAAGGA TCCAAAACTG AAGGCGATCG CCGACCAGAA GAAAGCCTCA
GGCAAACTGC TGAAAGCAGC AGTCACTTTC CCTGGCGGTA CCCACGACCT CTGGATGCGC
TACTGGCTGG CAGCCAATGG CATTGATCCC AACAATGACG CCGACCTGGT GGTGATTCCG
CCGCCACAGA TGGTCGCCAA CATGCAGACC GGTACCATGG ACACCTTCTG TGTGGGTGAG
CCGTGGAATG CACGCTTGGT CAACAAAAAA CTCGGTTACA CCGCTGCTGT GACTGGCGAA
CTCTGGAAGT TCCACCCCGA AAAAGCGCTG ACGATTCGCG CAGATTGGGC AGACAAAAAT
CCCAAAGCAA CAATGGCACT GCTCAAGGCT GTGCAAGAAG CCCAAATCTG GTGCGAAGAT
CCCGCCAACT TGGATGAGCT CTGCCAAATC ACTGCTCAAG ACAAATACTT CAAAACCAGC
GTCGAAGACA TCAAACCCCG CCTCCAAGGC GACATCGACT ATGGCGATGG CCGGTCGGTC
AAAAACTCTG ACCTGCGGAT GCGCTTCTGG AGTGAAAACG CCTCCTTCCC CTACAAGAGC
CATGATCTCT GGTTCCTGAC TGAGGACATT CGCTGGGGTT ATCTGCCCGC TTCGACCGAT
ACAAAAGCCT TGATCGAGAA GGTCAACCGT AGCGATCTCT GGCGCGAAGC TGCTAAGGCG
ATTGGTCGCG AGCAAGATAT TCCGGCTAGC GATTCCCGGG GGGTAGAGAC CTTCTTTGAC
GGTGTCACCT TCGACCCTGA AAATCCCCAG GCCTATCTCG ACGGTCTCAA GTTCAAAGCC
ATCAAAGCCT AA
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| Protein sequence | MSQFSRRKFL LTAGGTAAAA LWLNACGSNN SSTDTTGSTS TPAPSGTSGG DAPEVKGVTL
GFIALTDAAP VIIALEKGLF AKYGLPDTKV VKQTSWAVTR DNLELGSDRG GIDGAHILSP
MPYLLTAGTI TKSQKPLPMY ILARLNTQGQ GISLSNEFLA EKVQIKDPKL KAIADQKKAS
GKLLKAAVTF PGGTHDLWMR YWLAANGIDP NNDADLVVIP PPQMVANMQT GTMDTFCVGE
PWNARLVNKK LGYTAAVTGE LWKFHPEKAL TIRADWADKN PKATMALLKA VQEAQIWCED
PANLDELCQI TAQDKYFKTS VEDIKPRLQG DIDYGDGRSV KNSDLRMRFW SENASFPYKS
HDLWFLTEDI RWGYLPASTD TKALIEKVNR SDLWREAAKA IGREQDIPAS DSRGVETFFD
GVTFDPENPQ AYLDGLKFKA IKA
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