| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1223 |
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| Symbol | |
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| ID | 3773511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1243830 |
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| End bp | 1245008 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799652 |
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| Product | DevC protein |
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| Protein accession | YP_400240 |
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| Protein GI | 81300032 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR01185] DevC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.933137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTCG CTCTTAAATG GCCATGGCCA CGCCGGATTC CCCTCGCATG GCGACAGTTA
GCCCGCCAGC GGGTGCGACT GCTCGTGGCC TTAGCCGGCA TCAGCTTTGC CGGTCTGCTG
ATGTTTATGC AAATGGGCTT TCGCGACGGT CTGTTTGACA GCATCGTCAC CCTACATGAG
GCGATCGCGG CGGATGTGGT GCTGATCAGT CCGCAATCGA CCGCACTGAC GTCGATGCGG
CCTTTTCCGC AACGCCGCCT CTACCAAGCC CTCAGCCTGT CGGATGTGCA ATCGGTTAGC
CCGCTTTACA TCGGCTTGGT CAACTGGAAA AACCCAGAGA ACCGCCAACC GCGATCAATC
CTGACACTGG GCATTAGTCC GGATGAGGCC GCATTTGACC TCAAGGGCTT ACCGGAAAAT
CTCAATGCAA TCCGCATCCC AGATGTCGTG TTGTTTGACC AGACCTCGCG ATCGGAATTT
GGCCCAGTAG CCCAGCGTTT TCGGTCGGGG CAATCGGTGG TTACCGAGGT CGGCGAGCGG
CGGATTCGCG TCGGTGGACT GTTTACGATG GGCGCCACAT TTGGAGCCGA CGGCAATATC
ATCACTAGCG ATCTCAACTT CCTGCGTATC TTTCCTCAGC GACGACGCGA TGAGATTGAT
GTGGGGTTGA TCCGCGCTGA ACCCGGCACC AATATTGCCC AGCTCGTCCA AGAACTACAG
CGATCGCTGC CACCCGATGT GCGAGTCATG AGCAAGCGGC AATTTGTCGA ATTTGAGCGC
AACTATTGGG CGACCAGTAC AGCGATCGGC TTCATCTTCA CCTTCGGGAC GGTGATTGGC
TTCATTGTTG GCGGCGTGAT CGTCTATCAG ATTCTCTACA GCGATGTTTC GGACCATTTG
GCGGAGTACG CTACCCTCAA GGCGATGGGC TACAGCGATC GCTACTTACT GTGGGTCGTG
TTTCAAGAAG CCCTGATTCT GGCTGCGCTG GGCTATATTC CCGGCGTGAT TCTCTCGACA
GGTCTCTACG CCATCACCCG CAGCGCCACG ATGATCCCGA TTGGGATGAC CTTCGATCGC
GCCTCGATTG TCTTTATCCT CACCCTTGTC ATGTGTTTGG GGTCAGGCAT GATCGCGGTG
CGTCGCCTAG AGGCAGCTGA TCCAGCCGAC ATTTTCTAA
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| Protein sequence | MQVALKWPWP RRIPLAWRQL ARQRVRLLVA LAGISFAGLL MFMQMGFRDG LFDSIVTLHE
AIAADVVLIS PQSTALTSMR PFPQRRLYQA LSLSDVQSVS PLYIGLVNWK NPENRQPRSI
LTLGISPDEA AFDLKGLPEN LNAIRIPDVV LFDQTSRSEF GPVAQRFRSG QSVVTEVGER
RIRVGGLFTM GATFGADGNI ITSDLNFLRI FPQRRRDEID VGLIRAEPGT NIAQLVQELQ
RSLPPDVRVM SKRQFVEFER NYWATSTAIG FIFTFGTVIG FIVGGVIVYQ ILYSDVSDHL
AEYATLKAMG YSDRYLLWVV FQEALILAAL GYIPGVILST GLYAITRSAT MIPIGMTFDR
ASIVFILTLV MCLGSGMIAV RRLEAADPAD IF
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