Gene Synpcc7942_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1194 
Symbol 
ID3774430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1222698 
End bp1223495 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content59% 
IMG OID637799621 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_400211 
Protein GI81300003 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATAC GCTCGTGCCT GGCTGTGAAA TTGGGTCAAC AGTTCTGGAT TGTTGGTTCT 
GGAGGAGCTG CTACCTTGCC CACCCTAGGC GTCAATATTG ACCATGTTGC CACCGTGCGC
CAAGCTCGCC GGACGGTTGA GCCAGACCCG ATCGCGGCTG CTGTGCTGGC GGAGCTGGCA
GGTGCAGAAG GCATTACGGC GCATCTGCGG GAAGACCGTC GACATATTCA AGATCGTGAT
GTGCGCTTAC TTCGGCAGAC GGTACGCACC CGCCTCAATT TAGAAATGGC GGCCACGGAT
GAGATGGTGG CGATCGCCTT AGACATTCGC CCGGACTACG TCACCCTGGT GCCCGAACGG
CGGGAGGAAG TGACAACGGA AGGCGGTCTG AACGTGGTGG GGCAGCGCGA TCGCCTAGCT
CTGGTTGTCG ATCAGCTTCA AAGCGCTGGG ATTCCCGTCA GCTTGTTCAT CGATGCGGAA
CCGGATCAGA TTGCAGCGTC GGCTGCGATT CAAGCTCAGT GGATCGAGTT GCATACGGGT
CGCTATGCCG AGGCCGAGAC GGAAGCCGCC CAAGCTCAGG AACTCGCAGC ACTCCGCCAA
GGCTGTGAGC AAGCGATCGC AGCCGGTCTA CGCGTCAATG CGGGCCATGG ATTGACCTAC
TGGAACGTCT ATCCGGTGGC ACAGTTGCCG GGGATGGAAG AACTCAATAT TGGTCACACG
ATCATCAGTC GAGCCGTATT GGTTGGGCTA GAGCGGGCGG TGCGCGAAAT GAAGCTCGCA
ATGCAGGGTA AACTCTAG
 
Protein sequence
MDIRSCLAVK LGQQFWIVGS GGAATLPTLG VNIDHVATVR QARRTVEPDP IAAAVLAELA 
GAEGITAHLR EDRRHIQDRD VRLLRQTVRT RLNLEMAATD EMVAIALDIR PDYVTLVPER
REEVTTEGGL NVVGQRDRLA LVVDQLQSAG IPVSLFIDAE PDQIAASAAI QAQWIELHTG
RYAEAETEAA QAQELAALRQ GCEQAIAAGL RVNAGHGLTY WNVYPVAQLP GMEELNIGHT
IISRAVLVGL ERAVREMKLA MQGKL