Gene Synpcc7942_1151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1151 
Symbol 
ID3775101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1175883 
End bp1177466 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content59% 
IMG OID637799577 
Productbifunctional pantoate ligase/cytidylate kinase 
Protein accessionYP_400168 
Protein GI81299960 
COG category[F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0283] Cytidylate kinase
[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00017] cytidylate kinase
[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAAT TGATTAGCCC AGAGGCTCTT CGGGCCTTTC GCCAGTCGGT GCAAGGCTCT 
GTGGGCTTTG TGCCAACCAT GGGGGCGCTC CATGCTGGAC ACCGAAGTCT GATCGAGCGA
TCGCGCCAGC AAGATGACGT GGTCATCGTC AGCATCTTTG TCAATCCGCG CCAGTTTGGC
CCCCAAGAGG ATTTGAGTCG CTATCCGCAA ACCTTGGACG CAGACTTAGC CCTCTGTGAG
GCTGCGGGGG TAGATGCTGT TTTCTGTCCC ACTGCCGAGG CTCTCTACCC TCGTCCGAGC
GATCGCAGTA CAGGGGTACA GCCACCGGCT GAATTGATTC AGTCACTCTG TGGGCGACAG
CGACCAGGCC ATTTTCAGGG GGTGGCGACG GTGGTGCTCA AGTTGCTGCA ACTGGTGCAG
CCCCAGCGGG CTTACTTCGG CGAGAAGGAT GCTCAGCAAC TGCGGGTGAT TCAGCGGCTG
GTGGAGGATT TCAATCTGCC CATCGCGATC GTTCCTTGCC CTACCGTGCG GGAGCCGGAT
GGGTTGGCTC TCAGCTCGCG CAATCGCTAT CTGACCTTTG AAGAACGCAG TCAGGCCAGT
GGCCTCTATC GGGCTTTGCG AGCGGCAGCG GAATGCTTTC AGGCCGGGAG TCGCGACAGT
CAGGAGCTAG TCGCTGCTGC GACGGCGGTT CTGGCCACTA CGCCAGCGGT ACAACTGGAA
TATTGCGACT GTGTCGATGC CGACAGCCTC CAACCCTTGA CCCAAATCCC CGATCGCGCT
TTGCTGGCGA TCGCGGCGCG TGTAGGAACT GCTCGATTGA TCGATAACCT AACTTTGCAA
GGACGACGAC CAATCATTGC GATCGATGGC CCCGCCGGTG CTGGCAAATC GACGGTGACG
AAGCGGCTCG CCCAGCAATT GGGGTTGCTC TACCTCGATA CCGGCGCCAT GTATCGCGCT
GTGACTTGGC TCGTGCAGCA ACAGGGTATC GATCCGCAAG ATCCGATCGT CCTGGCGGAA
TTGCTTGCTC AAGCGGATCT GCAGTTGCGA TCGCAACCAG CGGCGGATGG CAGTGAGCAG
CTCCAGGTGC TCATTCAAGG TAACGACGTC ACGGCGGCCA TTCGCACCCC AACCGTGACG
GCTCAGGTGT CTGCGATCGC GGCTCTTCCC TTGGTCCGTC AGTTTTTGGT AGAGCAGCAA
CGTCAGCTAG GTCAGCGCGG TGGGCTCGTG GCCGAAGGTC GGGATATTGG CACCCATGTC
TTTCCCGACG CAGAACTGAA GATTTTTCTG ACAGCAACGA ATGCTGAGCG GGCGCGGCGG
CGCGCACTAG ACCTCGAAGC GCAGGGTCTG ACGGTTGATC TGGCGCAATT GGAAGCTGAA
ATCCGCGATC GCGATCGTCA AGATAGTGAA CGGGCGATCG CGCCACTCTG CAAGGCAGAA
GATGCCGTAG AAGTGTTGAC TGATGGTCTC AGCATTGAAG CGGTTACTGA CCAGATCATT
CGCCTCTATC GCGATCGGGG CTTAGGGGAC TCCAGTCCAC AAGCTACTCC TGGCCAAACA
CCGAGTCCTT TGAGTCTTGG ATGA
 
Protein sequence
MRQLISPEAL RAFRQSVQGS VGFVPTMGAL HAGHRSLIER SRQQDDVVIV SIFVNPRQFG 
PQEDLSRYPQ TLDADLALCE AAGVDAVFCP TAEALYPRPS DRSTGVQPPA ELIQSLCGRQ
RPGHFQGVAT VVLKLLQLVQ PQRAYFGEKD AQQLRVIQRL VEDFNLPIAI VPCPTVREPD
GLALSSRNRY LTFEERSQAS GLYRALRAAA ECFQAGSRDS QELVAAATAV LATTPAVQLE
YCDCVDADSL QPLTQIPDRA LLAIAARVGT ARLIDNLTLQ GRRPIIAIDG PAGAGKSTVT
KRLAQQLGLL YLDTGAMYRA VTWLVQQQGI DPQDPIVLAE LLAQADLQLR SQPAADGSEQ
LQVLIQGNDV TAAIRTPTVT AQVSAIAALP LVRQFLVEQQ RQLGQRGGLV AEGRDIGTHV
FPDAELKIFL TATNAERARR RALDLEAQGL TVDLAQLEAE IRDRDRQDSE RAIAPLCKAE
DAVEVLTDGL SIEAVTDQII RLYRDRGLGD SSPQATPGQT PSPLSLG