Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1150 |
Symbol | |
ID | 3775100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1175078 |
End bp | 1175734 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637799576 |
Product | hypothetical protein |
Protein accession | YP_400167 |
Protein GI | 81299959 |
COG category | [S] Function unknown |
COG ID | [COG3544] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGTC TATTGCTGCT GAGTGGCCTT GTTGTCAGTA GTGCACTGAC AGCAGTGACG ATCGCTTCAG TGTTGTCCAT CCCTGCTCGG GCAACACCGC CGGAATCCTC TGCGATCGCA CAGGAAATGT GGCCGTGGCG TTCCGGTTTT CCCAACAGGA TGGGTAACGC CGATCAACAC TTCATCGTGA TGATGATTCC GCACCACGAA GGCGCGATCG CCATGGCTGA TTTGGCGATT AGTCAAGCCA AGCACCCAGA ACTCCAAGCC TTGGCCCGAG CGATTCAAAC CAGCCAAACC CAAGAAGTTC GCGATATGCA GACTTGGTAC CGCCGGTGGT ATGGCTCGAC CGTACCAGAC TGGGACGATC GCCGAGTGAG CAGTTGGCGC AACTCTGGTA TGCCGAGCAT CGGGATGGGC TGTGCCGGTA GAGCAGGTCT CGCGACTGAT TTAATCGCTT TGCAGGCAGC CCCTGACTTC GATCGCGCTT TTATCGAAAT GATGATCCCC CACCACGAAA TGGGGGTGCG GATGGCTCAA ATGGTCTTAT TACGCAGCGA TCGCCCAGAA ATTCAACGAC TGGCTCAGGC AATCATCACG GATCAGAATC AGGAGATTCG CCAGATGCAG CAGTGGTATC GCCAGTGGTA TTCCTAG
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Protein sequence | MNRLLLLSGL VVSSALTAVT IASVLSIPAR ATPPESSAIA QEMWPWRSGF PNRMGNADQH FIVMMIPHHE GAIAMADLAI SQAKHPELQA LARAIQTSQT QEVRDMQTWY RRWYGSTVPD WDDRRVSSWR NSGMPSIGMG CAGRAGLATD LIALQAAPDF DRAFIEMMIP HHEMGVRMAQ MVLLRSDRPE IQRLAQAIIT DQNQEIRQMQ QWYRQWYS
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