Gene Synpcc7942_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1150 
Symbol 
ID3775100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1175078 
End bp1175734 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content55% 
IMG OID637799576 
Producthypothetical protein 
Protein accessionYP_400167 
Protein GI81299959 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGTC TATTGCTGCT GAGTGGCCTT GTTGTCAGTA GTGCACTGAC AGCAGTGACG 
ATCGCTTCAG TGTTGTCCAT CCCTGCTCGG GCAACACCGC CGGAATCCTC TGCGATCGCA
CAGGAAATGT GGCCGTGGCG TTCCGGTTTT CCCAACAGGA TGGGTAACGC CGATCAACAC
TTCATCGTGA TGATGATTCC GCACCACGAA GGCGCGATCG CCATGGCTGA TTTGGCGATT
AGTCAAGCCA AGCACCCAGA ACTCCAAGCC TTGGCCCGAG CGATTCAAAC CAGCCAAACC
CAAGAAGTTC GCGATATGCA GACTTGGTAC CGCCGGTGGT ATGGCTCGAC CGTACCAGAC
TGGGACGATC GCCGAGTGAG CAGTTGGCGC AACTCTGGTA TGCCGAGCAT CGGGATGGGC
TGTGCCGGTA GAGCAGGTCT CGCGACTGAT TTAATCGCTT TGCAGGCAGC CCCTGACTTC
GATCGCGCTT TTATCGAAAT GATGATCCCC CACCACGAAA TGGGGGTGCG GATGGCTCAA
ATGGTCTTAT TACGCAGCGA TCGCCCAGAA ATTCAACGAC TGGCTCAGGC AATCATCACG
GATCAGAATC AGGAGATTCG CCAGATGCAG CAGTGGTATC GCCAGTGGTA TTCCTAG
 
Protein sequence
MNRLLLLSGL VVSSALTAVT IASVLSIPAR ATPPESSAIA QEMWPWRSGF PNRMGNADQH 
FIVMMIPHHE GAIAMADLAI SQAKHPELQA LARAIQTSQT QEVRDMQTWY RRWYGSTVPD
WDDRRVSSWR NSGMPSIGMG CAGRAGLATD LIALQAAPDF DRAFIEMMIP HHEMGVRMAQ
MVLLRSDRPE IQRLAQAIIT DQNQEIRQMQ QWYRQWYS