Gene Synpcc7942_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1103 
Symbol 
ID3775053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1120323 
End bp1121054 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content59% 
IMG OID637799529 
Productglucosamine-6-phosphate isomerase 2 
Protein accessionYP_400120 
Protein GI81299912 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR00502] glucosamine-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.265713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGCC TAGTTTTCCC TTCGCCTGCT GACGTGATTC AAGCGGTCGC CGATCGCATT 
GCCGATCGCC TGCAAGCCCA ACCCGATCTG AGCTTGGGGC TGGCTACTGG CCGCACTATG
GTGCCCCTCT ATGCGGAGCT GCTGGGCCGC TCCCTCAACT GGCAGCATTG CCGCATCTTT
GCCCTAGATG AATATTGGGG TTTGGCGACC GATCATCCCA GCTCTTTTGC GGCGGAACTG
CGACAGCGTT TCTGTCAGCC TGCCGGTTTG CGACCTGAAC AAGTTCAGTT TCTGAACGGA
GCAGCCTTAG ATCCCGCCCA GGAATCGCAG CGCTACCGCC GTTGCCTAGA ACAGGCCGGT
GGCTTGGATC TGCAACTGCT AGGCCTAGGG GAAAACGGTC ATCTCGCCTT CAATGAACCG
GGTAGTGCTC GCGAGAGTCG CGTGCGCTTG GTTCAACTGA GCGATCGCAC GCGCCAGCAA
AATGCAGGAG CTTTCGGGGG CGATCCGGAG GCTGTCCCCA GCGCCGCTCT GAGTTTGGGG
TTGGCAGACA TCCTGGAAGC TCGGGAATTG CTATGGCTAG TAACCGGAGC TAGCAAGACC
AAAATTTTGG CGCAAGCCTT ACAGCCACCC CCAACAACGG CCATTCCTGC CTCTTACCTC
CAAGAGCACC CCGCCACAAC GCTCTATGCC GATCACGCTG CGGCAGCAGC ATTGACAGTG
GATCAATCTT GA
 
Protein sequence
MRCLVFPSPA DVIQAVADRI ADRLQAQPDL SLGLATGRTM VPLYAELLGR SLNWQHCRIF 
ALDEYWGLAT DHPSSFAAEL RQRFCQPAGL RPEQVQFLNG AALDPAQESQ RYRRCLEQAG
GLDLQLLGLG ENGHLAFNEP GSARESRVRL VQLSDRTRQQ NAGAFGGDPE AVPSAALSLG
LADILEAREL LWLVTGASKT KILAQALQPP PTTAIPASYL QEHPATTLYA DHAAAAALTV
DQS