Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1091 |
Symbol | |
ID | 3775041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1108372 |
End bp | 1109535 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637799517 |
Product | hypothetical protein |
Protein accession | YP_400108 |
Protein GI | 81299900 |
COG category | [S] Function unknown |
COG ID | [COG1565] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.25042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00000118713 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTCAGG CTATCCCCGA TCGCCTCTTA GAATGGTTGG AAAGCCAGCC CCAGCGCCGC TTGACGATGG CGCAGTTTAT GAGCTGGGCG CTCTACGATC CCGAGTCGGG CTACTACAGC AGCCGCACCG GGCAATTTGG CGATCGGGGT GATTTTGTCA CATCCCCCTC GCTTTCAGCT GATTTTGCCG AATTGCTGGC GGTACAAGCC GCAGAGTTTT GGCAAGTTCT CGGACGACCC GATCGCTTTG TTTGGGTCGA GATGGGGGCG GGCGCTGGCC AGTTTGCAGG GGACTTTTTA GCAGCGATCG CCGGAACCGA GTTAGAAGCA ACGTTGCACT ATCGCATCAT TGAGCGATCG CCCCAACTGC GGCGGCAGCA GCAAGAGCGA CTAGAACCCT GGCGCGATCG CGTCGATTGG TGGACTTGGG AAGACTGGGC CACTCAGCCA ACCGTCGGTG TGGCTTTCTC GAATGAGCTA GTGGATGCCC TGCCGGTGCA TCGGATCCAG TGGCAAGGGG GTGAATGGCA AGAAATTTAT GTGACGGAAA ATGCGGGGGT TCTGCAAGAA GTCTTGGGAC CGCTGTCGAG CCCTGACCTT GTTGATGTCT TTGCAGACTT GGGATTGGCA GCGGCGATCG CACGTCTGCC CGAGGGCTAC CGAACGGAGG TGCATCCGGC GGCGAAGCAG TGGCTCGCTC AGGTCGTTCA GGGATTGCAG CGGGGCTACT TGCTGACGAT CGATTACGGC TACAGCGGCG ATCGCTACTA CGCGGCTGGC CGCACGGATG GCACCCTTCA GGCCTACTGG CAGCAACGCT TTCACAACGA TCTCTATGCT CGGCCGGGGC AGCAAGATCT GACGGCCCAT GTCAATTTTT CAGCGCTGGA AGTCTGGGGC GAAGCGCTCG GGCTCAAACG CTTGGCCTTT ACGGAACAGG CTCTGTTTCT GATGGCGCTG GGCTTGGGCG ATCGCCTCAT GGCACTCTCC CAACCACAGT CCGGATCAGA CCTGAGTCAG TTGTTACGGC GACGCGAAGT GCTACACCGG TTGCTCGATC CCACCGCACT CGGAAACTTT GGGGTCTTGT TGCAAGGGCT CAACCTCAGT CCTGAAGAAC GAGCACAATC GTTACGTGGC TTCACAGTTC CAGCAAGCTT GTAA
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Protein sequence | MTQAIPDRLL EWLESQPQRR LTMAQFMSWA LYDPESGYYS SRTGQFGDRG DFVTSPSLSA DFAELLAVQA AEFWQVLGRP DRFVWVEMGA GAGQFAGDFL AAIAGTELEA TLHYRIIERS PQLRRQQQER LEPWRDRVDW WTWEDWATQP TVGVAFSNEL VDALPVHRIQ WQGGEWQEIY VTENAGVLQE VLGPLSSPDL VDVFADLGLA AAIARLPEGY RTEVHPAAKQ WLAQVVQGLQ RGYLLTIDYG YSGDRYYAAG RTDGTLQAYW QQRFHNDLYA RPGQQDLTAH VNFSALEVWG EALGLKRLAF TEQALFLMAL GLGDRLMALS QPQSGSDLSQ LLRRREVLHR LLDPTALGNF GVLLQGLNLS PEERAQSLRG FTVPASL
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