| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1053 |
|---|
| Symbol | |
|---|
| ID | 3773983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1064646 |
|---|
| End bp | 1065137 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637799475 |
|---|
| Product | phycocyanin, alpha subunit |
|---|
| Protein accession | YP_400070 |
|---|
| Protein GI | 81299862 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01338] phycocyanin, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.607744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0358189 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGA CTCCTCTGAC CGAAGCTGTC GCTGCTGCTG ATTCGCAAGG GCGTTTTCTG
AGCAGCACTG AACTGCAAGT TGCATTTGGT CGTTTCCGTC AAGCTGCTTC TGGTTTGGCA
GCGGCTAAGG CGTTGGCAAA CAATGCTGAC AGCTTGGTCA ACGGTGCAGC GAACGCTGTT
TACAGCAAGT TCCCCTACAC CACCAGCACG CCTGGCAACA ACTTTGCATC GACGCCGGAA
GGCAAAGCGA AGTGTGCGCG TGACATTGGT TACTATCTGC GGATTGTGAC CTATGCATTG
GTTGCGGGTG GCACGGGTCC GATTGATGAG TACCTGTTGG CAGGTCTTGA TGAGATCAAC
AAGACCTTCG ACTTGGCGCC GAGCTGGTAT GTGGAAGCGC TGAAGTACAT CAAAGCGAAT
CATGGCTTGA GTGGTGACTC TCGCGATGAA GCCAACTCCT ACATCGACTA CCTCATCAAT
GCCCTCAGCT AG
|
|---|
| Protein sequence | MSKTPLTEAV AAADSQGRFL SSTELQVAFG RFRQAASGLA AAKALANNAD SLVNGAANAV
YSKFPYTTST PGNNFASTPE GKAKCARDIG YYLRIVTYAL VAGGTGPIDE YLLAGLDEIN
KTFDLAPSWY VEALKYIKAN HGLSGDSRDE ANSYIDYLIN ALS
|
|---|
| |