| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1038 |
|---|
| Symbol | |
|---|
| ID | 3773968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1053264 |
|---|
| End bp | 1053851 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637799460 |
|---|
| Product | photosystem II oxygen-evolving complex 23K protein |
|---|
| Protein accession | YP_400055 |
|---|
| Protein GI | 81299847 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.723321 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCGT TCGCTCGTAT CATCTCGATG CTTTTGAATC GACTAGGGCT GAGTTTTGCG
ATCGCTAGTT TCCTTGTGCT AACTGCTTGT CAGACGATCA GCCTGCCTAT TTACCAAGGG
GCTAACTGGC AGTTCTCTTA CCCACCCGCT TGGATTGCCG TCGAGAATCC CGGCCTTGCC
ACGATCGCCT TTCGCGATCC CCTCAGCCCC GATCGCAATC TGAGTTTGTT GATCAGTCCA
GTGCCTGATA CCAGTCAGCT GTCCGATCTG GGCGATCCCA CAACTGTTGG CTACGAGCTC
CAAACCCAAT GGCTGAACCG TCCCGATCGG GGTCGACAGG TTGAGTTACT AGCCGCCGAA
CAGCAAGAAA CCGCCTTAGG GCCAGAATAT TTGCTGGAAT ATGCTGTGCA ATTGGAGCAG
CAATCCCGTC ATGATCTAGC GGCGATTGCC CTTGCTCGAG GACAACTCTA CACGTTTGTG
ATTTCCCTGC CAGCCGCTGA ATTTGAGCGG CAGCCCCAAC ACTATCGACA GATTTTACGA
TCGTTCCAAG TGCTATCTTT GAGCACCAAT TCCAGTGGCG AGGGCTAG
|
|---|
| Protein sequence | MLAFARIISM LLNRLGLSFA IASFLVLTAC QTISLPIYQG ANWQFSYPPA WIAVENPGLA
TIAFRDPLSP DRNLSLLISP VPDTSQLSDL GDPTTVGYEL QTQWLNRPDR GRQVELLAAE
QQETALGPEY LLEYAVQLEQ QSRHDLAAIA LARGQLYTFV ISLPAAEFER QPQHYRQILR
SFQVLSLSTN SSGEG
|
|---|
| |